Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
USH1GQ495M9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
USH1GQ495M9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.49■■□□□ 1.35
USH1GQ495M9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
USH1GQ495M9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.49■■□□□ 1.35
USH1GQ495M9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
USH1GQ495M9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
USH1GQ495M9 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.49■■□□□ 1.35
USH1GQ495M9 PNMA6B-201ENST00000538162 1200 ntBASIC23.49■■□□□ 1.35
USH1GQ495M9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.49■■□□□ 1.35
USH1GQ495M9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.49■■□□□ 1.35
USH1GQ495M9 C2orf69P4-201ENST00000565394 541 ntBASIC23.49■■□□□ 1.35
USH1GQ495M9 AC006058.3-201ENST00000606217 1069 ntBASIC23.49■■□□□ 1.35
USH1GQ495M9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
USH1GQ495M9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
USH1GQ495M9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
USH1GQ495M9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23.48■■□□□ 1.35
USH1GQ495M9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
USH1GQ495M9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
USH1GQ495M9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.48■■□□□ 1.35
USH1GQ495M9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
USH1GQ495M9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
USH1GQ495M9 AP003097.1-201ENST00000530657 1135 ntBASIC23.48■■□□□ 1.35
USH1GQ495M9 AC008687.6-201ENST00000596318 630 ntBASIC23.48■■□□□ 1.35
USH1GQ495M9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
USH1GQ495M9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
USH1GQ495M9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
USH1GQ495M9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
USH1GQ495M9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
USH1GQ495M9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
USH1GQ495M9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
USH1GQ495M9 PRORSD1P-201ENST00000295112 541 ntBASIC23.47■■□□□ 1.35
USH1GQ495M9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
USH1GQ495M9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.47■■□□□ 1.35
USH1GQ495M9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.47■■□□□ 1.35
USH1GQ495M9 AC026366.1-201ENST00000488803 879 ntBASIC23.47■■□□□ 1.35
USH1GQ495M9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
USH1GQ495M9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.47■■□□□ 1.35
USH1GQ495M9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.47■■□□□ 1.35
USH1GQ495M9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
USH1GQ495M9 AC027702.1-201ENST00000563810 1770 ntBASIC23.47■■□□□ 1.35
USH1GQ495M9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.47■■□□□ 1.35
USH1GQ495M9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
USH1GQ495M9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
USH1GQ495M9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
USH1GQ495M9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.47■■□□□ 1.35
USH1GQ495M9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
USH1GQ495M9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
USH1GQ495M9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
USH1GQ495M9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
USH1GQ495M9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
USH1GQ495M9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.46■■□□□ 1.35
USH1GQ495M9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
USH1GQ495M9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.46■■□□□ 1.35
USH1GQ495M9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
USH1GQ495M9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
USH1GQ495M9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.46■■□□□ 1.35
USH1GQ495M9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
USH1GQ495M9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
USH1GQ495M9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.46■■□□□ 1.35
USH1GQ495M9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.46■■□□□ 1.35
USH1GQ495M9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.46■■□□□ 1.35
USH1GQ495M9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.46■■□□□ 1.35
USH1GQ495M9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.45■■□□□ 1.35
USH1GQ495M9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.35
USH1GQ495M9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
USH1GQ495M9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.45■■□□□ 1.34
USH1GQ495M9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
USH1GQ495M9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
USH1GQ495M9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
USH1GQ495M9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
USH1GQ495M9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
USH1GQ495M9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.45■■□□□ 1.34
USH1GQ495M9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
USH1GQ495M9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
USH1GQ495M9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
USH1GQ495M9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
USH1GQ495M9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
USH1GQ495M9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
USH1GQ495M9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
USH1GQ495M9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
USH1GQ495M9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
USH1GQ495M9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
USH1GQ495M9 PLK5-205ENST00000642079 1969 ntBASIC23.44■■□□□ 1.34
USH1GQ495M9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
USH1GQ495M9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
USH1GQ495M9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
USH1GQ495M9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.44■■□□□ 1.34
USH1GQ495M9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
USH1GQ495M9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
USH1GQ495M9 AC008403.3-201ENST00000598924 454 ntBASIC23.44■■□□□ 1.34
USH1GQ495M9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
USH1GQ495M9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.44■■□□□ 1.34
USH1GQ495M9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
USH1GQ495M9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
USH1GQ495M9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.43■■□□□ 1.34
USH1GQ495M9 AC128676.1-201ENST00000454392 318 ntBASIC23.43■■□□□ 1.34
USH1GQ495M9 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.43■■□□□ 1.34
USH1GQ495M9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
USH1GQ495M9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms