Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRFAM7AQ494W8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRFAM7AQ494W8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CHRFAM7AQ494W8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRFAM7AQ494W8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRFAM7AQ494W8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRFAM7AQ494W8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRFAM7AQ494W8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRFAM7AQ494W8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CHRFAM7AQ494W8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CHRFAM7AQ494W8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 GUSBP6-202ENST00000438529 1198 ntBASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 AC010141.3-201ENST00000456659 717 ntBASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRFAM7AQ494W8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHRFAM7AQ494W8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHRFAM7AQ494W8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHRFAM7AQ494W8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHRFAM7AQ494W8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHRFAM7AQ494W8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHRFAM7AQ494W8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHRFAM7AQ494W8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CHRFAM7AQ494W8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRFAM7AQ494W8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRFAM7AQ494W8 KRT18P29-201ENST00000397031 1267 ntBASIC17.76■□□□□ 0.43
CHRFAM7AQ494W8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.76■□□□□ 0.43
CHRFAM7AQ494W8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.76■□□□□ 0.43
CHRFAM7AQ494W8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRFAM7AQ494W8 DUX4L16-201ENST00000555130 1264 ntBASIC17.76■□□□□ 0.43
CHRFAM7AQ494W8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRFAM7AQ494W8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRFAM7AQ494W8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CHRFAM7AQ494W8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRFAM7AQ494W8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRFAM7AQ494W8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRFAM7AQ494W8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRFAM7AQ494W8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRFAM7AQ494W8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 AF201337.1-201ENST00000520239 748 ntBASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 AC008687.6-201ENST00000596318 630 ntBASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 AC104187.1-201ENST00000607510 612 ntBASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHRFAM7AQ494W8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHRFAM7AQ494W8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHRFAM7AQ494W8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms