Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA1EQ15878 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.03■□□□□ 0.8
CACNA1EQ15878 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA1EQ15878 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.03■□□□□ 0.8
CACNA1EQ15878 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA1EQ15878 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA1EQ15878 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CACNA1EQ15878 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.03■□□□□ 0.8
CACNA1EQ15878 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CACNA1EQ15878 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CACNA1EQ15878 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA1EQ15878 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA1EQ15878 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.03■□□□□ 0.8
CACNA1EQ15878 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.03■□□□□ 0.8
CACNA1EQ15878 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CACNA1EQ15878 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CACNA1EQ15878 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CACNA1EQ15878 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA1EQ15878 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CACNA1EQ15878 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.02■□□□□ 0.8
CACNA1EQ15878 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.02■□□□□ 0.8
CACNA1EQ15878 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.02■□□□□ 0.8
CACNA1EQ15878 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA1EQ15878 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
CACNA1EQ15878 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.02■□□□□ 0.8
CACNA1EQ15878 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.02■□□□□ 0.8
CACNA1EQ15878 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.02■□□□□ 0.8
CACNA1EQ15878 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA1EQ15878 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.02■□□□□ 0.8
CACNA1EQ15878 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA1EQ15878 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CACNA1EQ15878 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CACNA1EQ15878 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.02■□□□□ 0.79
CACNA1EQ15878 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.02■□□□□ 0.79
CACNA1EQ15878 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.02■□□□□ 0.79
CACNA1EQ15878 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CACNA1EQ15878 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CACNA1EQ15878 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CACNA1EQ15878 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CACNA1EQ15878 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CACNA1EQ15878 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CACNA1EQ15878 PRKY-204ENST00000533551 1019 ntBASIC20.01■□□□□ 0.79
CACNA1EQ15878 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CACNA1EQ15878 AP003071.4-201ENST00000562276 1284 ntBASIC20.01■□□□□ 0.79
CACNA1EQ15878 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CACNA1EQ15878 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CACNA1EQ15878 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CACNA1EQ15878 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CACNA1EQ15878 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CACNA1EQ15878 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CACNA1EQ15878 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CACNA1EQ15878 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.01■□□□□ 0.79
CACNA1EQ15878 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CACNA1EQ15878 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CACNA1EQ15878 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CACNA1EQ15878 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CACNA1EQ15878 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.01■□□□□ 0.79
CACNA1EQ15878 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.01■□□□□ 0.79
CACNA1EQ15878 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.01■□□□□ 0.79
CACNA1EQ15878 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CACNA1EQ15878 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CACNA1EQ15878 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.01■□□□□ 0.79
CACNA1EQ15878 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20■□□□□ 0.79
CACNA1EQ15878 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20■□□□□ 0.79
CACNA1EQ15878 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CACNA1EQ15878 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20■□□□□ 0.79
CACNA1EQ15878 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CACNA1EQ15878 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20■□□□□ 0.79
CACNA1EQ15878 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CACNA1EQ15878 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20■□□□□ 0.79
CACNA1EQ15878 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20■□□□□ 0.79
CACNA1EQ15878 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20■□□□□ 0.79
CACNA1EQ15878 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20■□□□□ 0.79
CACNA1EQ15878 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20■□□□□ 0.79
CACNA1EQ15878 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CACNA1EQ15878 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20■□□□□ 0.79
CACNA1EQ15878 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.99■□□□□ 0.79
CACNA1EQ15878 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CACNA1EQ15878 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CACNA1EQ15878 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CACNA1EQ15878 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CACNA1EQ15878 ARMC10P1-201ENST00000313754 855 ntBASIC19.99■□□□□ 0.79
CACNA1EQ15878 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CACNA1EQ15878 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CACNA1EQ15878 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA1EQ15878 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
CACNA1EQ15878 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA1EQ15878 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.98■□□□□ 0.79
CACNA1EQ15878 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CACNA1EQ15878 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA1EQ15878 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
CACNA1EQ15878 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA1EQ15878 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA1EQ15878 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA1EQ15878 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA1EQ15878 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.98■□□□□ 0.79
CACNA1EQ15878 CD177P1-201ENST00000606252 935 ntBASIC19.98■□□□□ 0.79
CACNA1EQ15878 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA1EQ15878 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.98■□□□□ 0.79
CACNA1EQ15878 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms