Protein–RNA interactions for Protein: Q03691

ROT1, Protein ROT1, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ROT1Q03691 DAN4YJR151C 3486 nt3.19□□□□□ -1.9
ROT1Q03691 VIK1YPL253C 1944 nt3.19□□□□□ -1.9
ROT1Q03691 YNL034WYNL034W 1839 nt3.19□□□□□ -1.9
ROT1Q03691 YPR003CYPR003C 2265 nt3.18□□□□□ -1.9
ROT1Q03691 MNT3YIL014W 1893 nt3.18□□□□□ -1.9
ROT1Q03691 TIM13YGR181W 318 nt3.18□□□□□ -1.9
ROT1Q03691 YLR053CYLR053C 327 nt3.18□□□□□ -1.9
ROT1Q03691 LCL2YLR104W 396 nt3.18□□□□□ -1.9
ROT1Q03691 COA4YLR218C 453 nt3.18□□□□□ -1.9
ROT1Q03691 SHH3YMR118C 591 nt3.18□□□□□ -1.9
ROT1Q03691 GOT1YMR292W 417 nt3.18□□□□□ -1.9
ROT1Q03691 snR191snR191 274 nt3.18□□□□□ -1.9
ROT1Q03691 RPA135YPR010C 3612 nt3.18□□□□□ -1.9
ROT1Q03691 BFA1YJR053W 1725 nt3.18□□□□□ -1.9
ROT1Q03691 TRK1YJL129C 3708 nt3.17□□□□□ -1.9
ROT1Q03691 YKU70YMR284W 1809 nt3.17□□□□□ -1.9
ROT1Q03691 YGL239CYGL239C 315 nt3.17□□□□□ -1.9
ROT1Q03691 YGR027W-BYGR027W-B 5268 nt3.17□□□□□ -1.9
ROT1Q03691 YLR227W-BYLR227W-B 5268 nt3.17□□□□□ -1.9
ROT1Q03691 YPR158C-DYPR158C-D 5268 nt3.17□□□□□ -1.9
ROT1Q03691 VPS64YDR200C 1815 nt3.16□□□□□ -1.9
ROT1Q03691 PWP2YCR057C 2772 nt3.16□□□□□ -1.9
ROT1Q03691 MCD4YKL165C 2760 nt3.16□□□□□ -1.9
ROT1Q03691 BRO1YPL084W 2535 nt3.16□□□□□ -1.9
ROT1Q03691 tV(CAC)DtV(CAC)D 73 nt3.16□□□□□ -1.9
ROT1Q03691 tV(CAC)HtV(CAC)H 73 nt3.16□□□□□ -1.9
ROT1Q03691 YOR073W-AYOR073W-A 234 nt3.16□□□□□ -1.9
ROT1Q03691 CPA2YJR109C 3357 nt3.16□□□□□ -1.9
ROT1Q03691 YJL181WYJL181W 1836 nt3.16□□□□□ -1.9
ROT1Q03691 BIT61YJL058C 1632 nt3.15□□□□□ -1.9
ROT1Q03691 snR79snR79 84 nt3.15□□□□□ -1.91
ROT1Q03691 YMR141W-AYMR141W-A 225 nt3.15□□□□□ -1.91
ROT1Q03691 YNL010WYNL010W 726 nt3.15□□□□□ -1.91
ROT1Q03691 YPR014CYPR014C 330 nt3.15□□□□□ -1.91
ROT1Q03691 YCG1YDR325W 3108 nt3.15□□□□□ -1.91
ROT1Q03691 ECM5YMR176W 4236 nt3.15□□□□□ -1.91
ROT1Q03691 TFB1YDR311W 1929 nt3.15□□□□□ -1.91
ROT1Q03691 CCM1YGR150C 2595 nt3.14□□□□□ -1.91
ROT1Q03691 ECM25YJL201W 1800 nt3.14□□□□□ -1.91
ROT1Q03691 SOK2YMR016C 2358 nt3.14□□□□□ -1.91
ROT1Q03691 PAU2YEL049W 363 nt3.14□□□□□ -1.91
ROT1Q03691 YER121WYER121W 345 nt3.14□□□□□ -1.91
ROT1Q03691 YJL135WYJL135W 318 nt3.14□□□□□ -1.91
ROT1Q03691 SOD1YJR104C 465 nt3.14□□□□□ -1.91
ROT1Q03691 RPL36AYMR194W 303 nt3.14□□□□□ -1.91
ROT1Q03691 CYB5YNL111C 363 nt3.14□□□□□ -1.91
ROT1Q03691 TRM7YBR061C 933 nt3.14□□□□□ -1.91
ROT1Q03691 URA2YJL130C 6645 nt3.14□□□□□ -1.91
ROT1Q03691 SIP3YNL257C 3690 nt3.14□□□□□ -1.91
ROT1Q03691 LEU3YLR451W 2661 nt3.14□□□□□ -1.91
ROT1Q03691 GYP7YDL234C 2241 nt3.13□□□□□ -1.91
ROT1Q03691 BNI4YNL233W 2679 nt3.13□□□□□ -1.91
ROT1Q03691 TOP1YOL006C 2310 nt3.13□□□□□ -1.91
ROT1Q03691 YEL014CYEL014C 306 nt3.13□□□□□ -1.91
ROT1Q03691 YEL032C-AYEL032C-A 162 nt3.13□□□□□ -1.91
ROT1Q03691 VPS55YJR044C 423 nt3.13□□□□□ -1.91
ROT1Q03691 NPR1YNL183C 2373 nt3.13□□□□□ -1.91
ROT1Q03691 YRM1YOR172W 2361 nt3.13□□□□□ -1.91
ROT1Q03691 TCP1YDR212W 1680 nt3.13□□□□□ -1.91
ROT1Q03691 COX23YHR116W 456 nt3.12□□□□□ -1.91
ROT1Q03691 YLR140WYLR140W 327 nt3.12□□□□□ -1.91
ROT1Q03691 HHT1YBR010W 411 nt3.12□□□□□ -1.91
ROT1Q03691 YPR063CYPR063C 423 nt3.12□□□□□ -1.91
ROT1Q03691 YPR146CYPR146C 330 nt3.12□□□□□ -1.91
ROT1Q03691 TIM12YBR091C 330 nt3.12□□□□□ -1.91
ROT1Q03691 SEG1YMR086W 2883 nt3.12□□□□□ -1.91
ROT1Q03691 REC8YPR007C 2043 nt3.12□□□□□ -1.91
ROT1Q03691 NOP4YPL043W 2058 nt3.12□□□□□ -1.91
ROT1Q03691 DOA4YDR069C 2781 nt3.12□□□□□ -1.91
ROT1Q03691 YIL166CYIL166C 1629 nt3.11□□□□□ -1.91
ROT1Q03691 YHL041WYHL041W 450 nt3.11□□□□□ -1.91
ROT1Q03691 TAF6YGL112C 1551 nt3.11□□□□□ -1.91
ROT1Q03691 NSP1YJL041W 2472 nt3.11□□□□□ -1.91
ROT1Q03691 ETP1YHL010C 1758 nt3.1□□□□□ -1.91
ROT1Q03691 STU2YLR045C 2667 nt3.1□□□□□ -1.91
ROT1Q03691 YGL140CYGL140C 3660 nt3.1□□□□□ -1.91
ROT1Q03691 SPA2YLL021W 4401 nt3.1□□□□□ -1.91
ROT1Q03691 RPS17BYDR447C 411 nt3.1□□□□□ -1.91
ROT1Q03691 tF(GAA)QtF(GAA)Q 75 nt3.1□□□□□ -1.91
ROT1Q03691 ANB1YJR047C 474 nt3.1□□□□□ -1.91
ROT1Q03691 DIS3YOL021C 3006 nt3.1□□□□□ -1.91
ROT1Q03691 FLO10YKR102W 3510 nt3.1□□□□□ -1.91
ROT1Q03691 RAD26YJR035W 3258 nt3.1□□□□□ -1.91
ROT1Q03691 IOC2YLR095C 2439 nt3.09□□□□□ -1.91
ROT1Q03691 APC11YDL008W 498 nt3.09□□□□□ -1.91
ROT1Q03691 PSF1YDR013W 627 nt3.09□□□□□ -1.91
ROT1Q03691 YGR164WYGR164W 336 nt3.09□□□□□ -1.91
ROT1Q03691 YBR178WYBR178W 375 nt3.09□□□□□ -1.91
ROT1Q03691 PKH1YDR490C 2301 nt3.09□□□□□ -1.92
ROT1Q03691 ABP140YOR239W 1887 nt3.08□□□□□ -1.92
ROT1Q03691 tF(GAA)DtF(GAA)D 73 nt3.08□□□□□ -1.92
ROT1Q03691 tF(GAA)NtF(GAA)N 73 nt3.08□□□□□ -1.92
ROT1Q03691 YJL222W-BYJL222W-B 138 nt3.08□□□□□ -1.92
ROT1Q03691 SAR1YPL218W 573 nt3.08□□□□□ -1.92
ROT1Q03691 snR48snR48 113 nt3.08□□□□□ -1.92
ROT1Q03691 MET10YFR030W 3108 nt3.08□□□□□ -1.92
ROT1Q03691 ARO1YDR127W 4767 nt3.07□□□□□ -1.92
ROT1Q03691 REG1YDR028C 3045 nt3.07□□□□□ -1.92
ROT1Q03691 EMC1YCL045C 2283 nt3.07□□□□□ -1.92
ROT1Q03691 YMR317WYMR317W 3423 nt3.07□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 23.8 ms