Protein–RNA interactions for Protein: P82673

MRPS35, 28S ribosomal protein S35, mitochondrial, humanhuman

Known RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35P82673 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MRPS35P82673 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRPS35P82673 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRPS35P82673 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
MRPS35P82673 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRPS35P82673 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
MRPS35P82673 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRPS35P82673 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRPS35P82673 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MRPS35P82673 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
MRPS35P82673 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MRPS35P82673 AL354811.1-201ENST00000610286 706 ntBASIC19.97■□□□□ 0.79
MRPS35P82673 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.97■□□□□ 0.79
MRPS35P82673 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MRPS35P82673 AC003102.1-202ENST00000563394 1796 ntBASIC19.97■□□□□ 0.79
MRPS35P82673 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRPS35P82673 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
MRPS35P82673 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MRPS35P82673 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRPS35P82673 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.97■□□□□ 0.79
MRPS35P82673 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRPS35P82673 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.97■□□□□ 0.79
MRPS35P82673 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
MRPS35P82673 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.97■□□□□ 0.79
MRPS35P82673 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.97■□□□□ 0.79
MRPS35P82673 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.97■□□□□ 0.79
MRPS35P82673 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.97■□□□□ 0.79
MRPS35P82673 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPS35P82673 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPS35P82673 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPS35P82673 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPS35P82673 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPS35P82673 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPS35P82673 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MRPS35P82673 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPS35P82673 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
MRPS35P82673 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPS35P82673 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPS35P82673 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPS35P82673 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.96■□□□□ 0.79
MRPS35P82673 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.96■□□□□ 0.79
MRPS35P82673 AL358852.1-201ENST00000623174 1268 ntBASIC19.96■□□□□ 0.79
MRPS35P82673 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
MRPS35P82673 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MRPS35P82673 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.96■□□□□ 0.79
MRPS35P82673 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.96■□□□□ 0.79
MRPS35P82673 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPS35P82673 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
MRPS35P82673 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
MRPS35P82673 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MRPS35P82673 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.95■□□□□ 0.78
MRPS35P82673 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.95■□□□□ 0.78
MRPS35P82673 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MRPS35P82673 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MRPS35P82673 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MRPS35P82673 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.95■□□□□ 0.78
MRPS35P82673 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
MRPS35P82673 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.95■□□□□ 0.78
MRPS35P82673 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.95■□□□□ 0.78
MRPS35P82673 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.95■□□□□ 0.78
MRPS35P82673 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
MRPS35P82673 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.95■□□□□ 0.78
MRPS35P82673 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
MRPS35P82673 AC004408.2-201ENST00000623613 2777 ntBASIC19.95■□□□□ 0.78
MRPS35P82673 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.94■□□□□ 0.78
MRPS35P82673 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.94■□□□□ 0.78
MRPS35P82673 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MRPS35P82673 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
MRPS35P82673 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MRPS35P82673 AC009237.3-201ENST00000393279 1427 ntBASIC19.94■□□□□ 0.78
MRPS35P82673 AC005224.4-201ENST00000583262 1652 ntBASIC19.94■□□□□ 0.78
MRPS35P82673 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.94■□□□□ 0.78
MRPS35P82673 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
MRPS35P82673 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MRPS35P82673 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MRPS35P82673 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
MRPS35P82673 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.94■□□□□ 0.78
MRPS35P82673 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.94■□□□□ 0.78
MRPS35P82673 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MRPS35P82673 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MRPS35P82673 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
MRPS35P82673 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.94■□□□□ 0.78
MRPS35P82673 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.94■□□□□ 0.78
MRPS35P82673 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MRPS35P82673 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MRPS35P82673 AP000974.1-201ENST00000623909 2387 ntBASIC19.93■□□□□ 0.78
MRPS35P82673 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MRPS35P82673 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MRPS35P82673 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MRPS35P82673 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
MRPS35P82673 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MRPS35P82673 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MRPS35P82673 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MRPS35P82673 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.93■□□□□ 0.78
MRPS35P82673 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MRPS35P82673 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MRPS35P82673 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MRPS35P82673 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.92■□□□□ 0.78
MRPS35P82673 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MRPS35P82673 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms