Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4CP60510 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24.32■■□□□ 1.48
PPP4CP60510 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4CP60510 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
PPP4CP60510 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4CP60510 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC24.32■■□□□ 1.48
PPP4CP60510 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4CP60510 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4CP60510 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4CP60510 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4CP60510 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4CP60510 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4CP60510 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4CP60510 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4CP60510 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4CP60510 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4CP60510 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4CP60510 AC233263.1-201ENST00000578059 224 ntBASIC24.31■■□□□ 1.48
PPP4CP60510 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC24.31■■□□□ 1.48
PPP4CP60510 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.31■■□□□ 1.48
PPP4CP60510 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
PPP4CP60510 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
PPP4CP60510 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4CP60510 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC24.31■■□□□ 1.48
PPP4CP60510 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
PPP4CP60510 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4CP60510 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PPP4CP60510 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4CP60510 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4CP60510 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4CP60510 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4CP60510 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
PPP4CP60510 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4CP60510 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4CP60510 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC24.3■■□□□ 1.48
PPP4CP60510 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
PPP4CP60510 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
PPP4CP60510 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4CP60510 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC24.3■■□□□ 1.48
PPP4CP60510 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
PPP4CP60510 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
PPP4CP60510 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4CP60510 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4CP60510 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4CP60510 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
PPP4CP60510 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4CP60510 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4CP60510 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4CP60510 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4CP60510 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
PPP4CP60510 AL158047.1-201ENST00000445918 881 ntBASIC24.29■■□□□ 1.48
PPP4CP60510 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC24.29■■□□□ 1.48
PPP4CP60510 AC093827.2-201ENST00000512654 315 ntBASIC24.29■■□□□ 1.48
PPP4CP60510 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC24.29■■□□□ 1.48
PPP4CP60510 AC069544.1-201ENST00000609399 999 ntBASIC24.29■■□□□ 1.48
PPP4CP60510 AC120498.8-201ENST00000614275 531 ntBASIC24.29■■□□□ 1.48
PPP4CP60510 AL359736.2-201ENST00000621992 437 ntBASIC24.29■■□□□ 1.48
PPP4CP60510 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC24.29■■□□□ 1.48
PPP4CP60510 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
PPP4CP60510 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4CP60510 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4CP60510 STK25-205ENST00000405883 1904 ntTSL 2 BASIC24.29■■□□□ 1.48
PPP4CP60510 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC24.29■■□□□ 1.48
PPP4CP60510 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC24.29■■□□□ 1.48
PPP4CP60510 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4CP60510 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4CP60510 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4CP60510 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.28■■□□□ 1.48
PPP4CP60510 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4CP60510 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4CP60510 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4CP60510 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4CP60510 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PPP4CP60510 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4CP60510 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4CP60510 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24.28■■□□□ 1.48
PPP4CP60510 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC24.28■■□□□ 1.48
PPP4CP60510 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4CP60510 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24.28■■□□□ 1.48
PPP4CP60510 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4CP60510 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC24.28■■□□□ 1.48
PPP4CP60510 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4CP60510 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4CP60510 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4CP60510 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4CP60510 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4CP60510 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
PPP4CP60510 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PPP4CP60510 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPP4CP60510 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC24.27■■□□□ 1.48
PPP4CP60510 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PPP4CP60510 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
PPP4CP60510 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC24.27■■□□□ 1.48
PPP4CP60510 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
PPP4CP60510 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPP4CP60510 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC24.27■■□□□ 1.48
PPP4CP60510 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
PPP4CP60510 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.27■■□□□ 1.48
PPP4CP60510 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PPP4CP60510 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms