Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
VSX2P58304 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
VSX2P58304 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VSX2P58304 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VSX2P58304 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VSX2P58304 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
VSX2P58304 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.53■□□□□ 0.72
VSX2P58304 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VSX2P58304 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VSX2P58304 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VSX2P58304 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VSX2P58304 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VSX2P58304 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
VSX2P58304 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.53■□□□□ 0.72
VSX2P58304 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VSX2P58304 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VSX2P58304 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.53■□□□□ 0.72
VSX2P58304 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.53■□□□□ 0.72
VSX2P58304 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VSX2P58304 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.53■□□□□ 0.72
VSX2P58304 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
VSX2P58304 PLK5-205ENST00000642079 1969 ntBASIC19.53■□□□□ 0.72
VSX2P58304 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.53■□□□□ 0.72
VSX2P58304 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VSX2P58304 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VSX2P58304 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VSX2P58304 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.52■□□□□ 0.72
VSX2P58304 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
VSX2P58304 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.52■□□□□ 0.72
VSX2P58304 AC087633.2-202ENST00000565166 1439 ntBASIC19.52■□□□□ 0.72
VSX2P58304 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VSX2P58304 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VSX2P58304 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VSX2P58304 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VSX2P58304 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VSX2P58304 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.52■□□□□ 0.72
VSX2P58304 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VSX2P58304 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
VSX2P58304 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.52■□□□□ 0.72
VSX2P58304 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.52■□□□□ 0.72
VSX2P58304 AC091874.3-201ENST00000512672 1195 ntBASIC19.52■□□□□ 0.72
VSX2P58304 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.52■□□□□ 0.72
VSX2P58304 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.52■□□□□ 0.72
VSX2P58304 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VSX2P58304 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.52■□□□□ 0.72
VSX2P58304 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
VSX2P58304 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
VSX2P58304 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
VSX2P58304 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VSX2P58304 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VSX2P58304 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VSX2P58304 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
VSX2P58304 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
VSX2P58304 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.51■□□□□ 0.71
VSX2P58304 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
VSX2P58304 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VSX2P58304 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
VSX2P58304 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
VSX2P58304 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VSX2P58304 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.51■□□□□ 0.71
VSX2P58304 AC097658.1-201ENST00000475555 843 ntBASIC19.51■□□□□ 0.71
VSX2P58304 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.51■□□□□ 0.71
VSX2P58304 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.51■□□□□ 0.71
VSX2P58304 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
VSX2P58304 AC027702.1-201ENST00000563810 1770 ntBASIC19.51■□□□□ 0.71
VSX2P58304 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VSX2P58304 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VSX2P58304 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VSX2P58304 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
VSX2P58304 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VSX2P58304 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VSX2P58304 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VSX2P58304 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VSX2P58304 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VSX2P58304 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VSX2P58304 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VSX2P58304 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
VSX2P58304 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
VSX2P58304 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.5■□□□□ 0.71
VSX2P58304 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VSX2P58304 PGM5P4-201ENST00000421970 445 ntBASIC19.5■□□□□ 0.71
VSX2P58304 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
VSX2P58304 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.5■□□□□ 0.71
VSX2P58304 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.5■□□□□ 0.71
VSX2P58304 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.5■□□□□ 0.71
VSX2P58304 AC105020.6-201ENST00000621523 1217 ntBASIC19.5■□□□□ 0.71
VSX2P58304 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
VSX2P58304 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VSX2P58304 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
VSX2P58304 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
VSX2P58304 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VSX2P58304 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.49■□□□□ 0.71
VSX2P58304 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.49■□□□□ 0.71
VSX2P58304 AL137060.1-201ENST00000618151 2648 ntBASIC19.49■□□□□ 0.71
VSX2P58304 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VSX2P58304 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
VSX2P58304 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.49■□□□□ 0.71
VSX2P58304 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VSX2P58304 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.49■□□□□ 0.71
VSX2P58304 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms