Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.67■□□□□ 0.74
CLDN6P56747 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CLDN6P56747 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN6P56747 AC116050.2-201ENST00000612102 1779 ntBASIC19.67■□□□□ 0.74
CLDN6P56747 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN6P56747 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN6P56747 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN6P56747 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN6P56747 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN6P56747 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN6P56747 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.66■□□□□ 0.74
CLDN6P56747 PRKY-204ENST00000533551 1019 ntBASIC19.66■□□□□ 0.74
CLDN6P56747 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN6P56747 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN6P56747 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN6P56747 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLDN6P56747 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN6P56747 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN6P56747 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN6P56747 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN6P56747 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN6P56747 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN6P56747 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN6P56747 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLDN6P56747 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN6P56747 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN6P56747 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN6P56747 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN6P56747 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN6P56747 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.65■□□□□ 0.74
CLDN6P56747 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN6P56747 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN6P56747 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.65■□□□□ 0.74
CLDN6P56747 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.65■□□□□ 0.74
CLDN6P56747 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN6P56747 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN6P56747 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN6P56747 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.65■□□□□ 0.74
CLDN6P56747 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN6P56747 AL445228.2-201ENST00000605589 952 ntBASIC19.65■□□□□ 0.74
CLDN6P56747 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.65■□□□□ 0.74
CLDN6P56747 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN6P56747 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN6P56747 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.64■□□□□ 0.74
CLDN6P56747 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CLDN6P56747 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN6P56747 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.64■□□□□ 0.73
CLDN6P56747 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN6P56747 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN6P56747 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN6P56747 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.64■□□□□ 0.73
CLDN6P56747 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN6P56747 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CLDN6P56747 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.64■□□□□ 0.73
CLDN6P56747 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.64■□□□□ 0.73
CLDN6P56747 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CLDN6P56747 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN6P56747 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CLDN6P56747 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN6P56747 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CLDN6P56747 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.64■□□□□ 0.73
CLDN6P56747 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN6P56747 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.64■□□□□ 0.73
CLDN6P56747 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.64■□□□□ 0.73
CLDN6P56747 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN6P56747 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN6P56747 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN6P56747 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CLDN6P56747 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN6P56747 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN6P56747 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.63■□□□□ 0.73
CLDN6P56747 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN6P56747 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN6P56747 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN6P56747 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN6P56747 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN6P56747 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CLDN6P56747 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN6P56747 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN6P56747 AC012306.2-201ENST00000609350 630 ntBASIC19.63■□□□□ 0.73
CLDN6P56747 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN6P56747 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms