Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXG1P55316 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXG1P55316 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXG1P55316 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXG1P55316 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXG1P55316 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXG1P55316 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXG1P55316 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXG1P55316 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
FOXG1P55316 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXG1P55316 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
FOXG1P55316 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.93■□□□□ 0.46
FOXG1P55316 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXG1P55316 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXG1P55316 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.93■□□□□ 0.46
FOXG1P55316 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXG1P55316 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.93■□□□□ 0.46
FOXG1P55316 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXG1P55316 AL356652.1-201ENST00000615962 565 ntBASIC17.93■□□□□ 0.46
FOXG1P55316 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.93■□□□□ 0.46
FOXG1P55316 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
FOXG1P55316 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXG1P55316 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
FOXG1P55316 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
FOXG1P55316 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXG1P55316 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXG1P55316 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXG1P55316 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.93■□□□□ 0.46
FOXG1P55316 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXG1P55316 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXG1P55316 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXG1P55316 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXG1P55316 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXG1P55316 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.92■□□□□ 0.46
FOXG1P55316 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXG1P55316 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.92■□□□□ 0.46
FOXG1P55316 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXG1P55316 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXG1P55316 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXG1P55316 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXG1P55316 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXG1P55316 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXG1P55316 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXG1P55316 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
FOXG1P55316 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.92■□□□□ 0.46
FOXG1P55316 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXG1P55316 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXG1P55316 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXG1P55316 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.92■□□□□ 0.46
FOXG1P55316 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXG1P55316 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.92■□□□□ 0.46
FOXG1P55316 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
FOXG1P55316 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXG1P55316 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXG1P55316 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.91■□□□□ 0.46
FOXG1P55316 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.91■□□□□ 0.46
FOXG1P55316 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXG1P55316 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXG1P55316 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXG1P55316 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXG1P55316 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXG1P55316 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXG1P55316 AC097658.1-201ENST00000475555 843 ntBASIC17.91■□□□□ 0.46
FOXG1P55316 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXG1P55316 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXG1P55316 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.91■□□□□ 0.46
FOXG1P55316 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXG1P55316 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.91■□□□□ 0.46
FOXG1P55316 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXG1P55316 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXG1P55316 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXG1P55316 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXG1P55316 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
FOXG1P55316 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXG1P55316 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXG1P55316 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXG1P55316 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
FOXG1P55316 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXG1P55316 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXG1P55316 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXG1P55316 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXG1P55316 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXG1P55316 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXG1P55316 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
FOXG1P55316 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.9■□□□□ 0.46
FOXG1P55316 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXG1P55316 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.9■□□□□ 0.46
FOXG1P55316 KRT18P6-201ENST00000555540 1265 ntBASIC17.9■□□□□ 0.46
FOXG1P55316 AC007225.1-201ENST00000566331 1836 ntBASIC17.9■□□□□ 0.46
FOXG1P55316 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXG1P55316 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXG1P55316 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
FOXG1P55316 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
FOXG1P55316 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXG1P55316 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXG1P55316 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXG1P55316 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.89■□□□□ 0.46
FOXG1P55316 KRT8P36-201ENST00000489121 1440 ntBASIC17.89■□□□□ 0.46
FOXG1P55316 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXG1P55316 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms