Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH11P55287 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH11P55287 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH11P55287 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH11P55287 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH11P55287 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH11P55287 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDH11P55287 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH11P55287 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.65■□□□□ 0.58
CDH11P55287 AC016769.1-201ENST00000409132 1010 ntBASIC18.65■□□□□ 0.58
CDH11P55287 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.65■□□□□ 0.58
CDH11P55287 AC079140.4-201ENST00000507448 529 ntBASIC18.65■□□□□ 0.58
CDH11P55287 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH11P55287 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH11P55287 AC137761.2-201ENST00000561729 223 ntBASIC18.65■□□□□ 0.58
CDH11P55287 AC145350.3-201ENST00000569033 163 ntBASIC18.65■□□□□ 0.58
CDH11P55287 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH11P55287 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH11P55287 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH11P55287 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH11P55287 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH11P55287 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH11P55287 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH11P55287 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH11P55287 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH11P55287 AC004854.2-201ENST00000608450 1441 ntBASIC18.65■□□□□ 0.58
CDH11P55287 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CDH11P55287 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDH11P55287 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CDH11P55287 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH11P55287 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH11P55287 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH11P55287 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH11P55287 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH11P55287 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH11P55287 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH11P55287 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH11P55287 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH11P55287 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH11P55287 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH11P55287 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH11P55287 KRT18P61-201ENST00000585825 1298 ntBASIC18.64■□□□□ 0.57
CDH11P55287 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH11P55287 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH11P55287 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH11P55287 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH11P55287 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH11P55287 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH11P55287 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH11P55287 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH11P55287 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH11P55287 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH11P55287 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH11P55287 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH11P55287 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH11P55287 FP700111.2-201ENST00000619190 1892 ntBASIC18.63■□□□□ 0.57
CDH11P55287 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH11P55287 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH11P55287 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH11P55287 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.63■□□□□ 0.57
CDH11P55287 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH11P55287 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.63■□□□□ 0.57
CDH11P55287 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.63■□□□□ 0.57
CDH11P55287 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.63■□□□□ 0.57
CDH11P55287 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH11P55287 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CDH11P55287 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH11P55287 AC009237.3-201ENST00000393279 1427 ntBASIC18.63■□□□□ 0.57
CDH11P55287 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH11P55287 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH11P55287 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH11P55287 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH11P55287 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH11P55287 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.63■□□□□ 0.57
CDH11P55287 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDH11P55287 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH11P55287 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH11P55287 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH11P55287 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH11P55287 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CDH11P55287 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH11P55287 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH11P55287 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.62■□□□□ 0.57
CDH11P55287 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH11P55287 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH11P55287 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDH11P55287 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CDH11P55287 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH11P55287 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDH11P55287 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CDH11P55287 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH11P55287 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CDH11P55287 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.61■□□□□ 0.57
CDH11P55287 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH11P55287 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH11P55287 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDH11P55287 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH11P55287 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH11P55287 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH11P55287 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms