Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLNS1AP54105 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
CLNS1AP54105 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLNS1AP54105 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLNS1AP54105 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLNS1AP54105 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CLNS1AP54105 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.22■□□□□ 0.83
CLNS1AP54105 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.22■□□□□ 0.83
CLNS1AP54105 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLNS1AP54105 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLNS1AP54105 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLNS1AP54105 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLNS1AP54105 AP005212.1-201ENST00000581547 1997 ntBASIC20.22■□□□□ 0.83
CLNS1AP54105 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.22■□□□□ 0.83
CLNS1AP54105 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.22■□□□□ 0.83
CLNS1AP54105 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLNS1AP54105 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLNS1AP54105 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CLNS1AP54105 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CLNS1AP54105 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLNS1AP54105 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLNS1AP54105 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.22■□□□□ 0.83
CLNS1AP54105 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CLNS1AP54105 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLNS1AP54105 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLNS1AP54105 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CLNS1AP54105 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLNS1AP54105 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CLNS1AP54105 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CLNS1AP54105 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.21■□□□□ 0.83
CLNS1AP54105 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLNS1AP54105 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.21■□□□□ 0.83
CLNS1AP54105 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLNS1AP54105 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLNS1AP54105 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLNS1AP54105 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLNS1AP54105 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLNS1AP54105 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLNS1AP54105 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLNS1AP54105 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLNS1AP54105 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.21■□□□□ 0.83
CLNS1AP54105 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.21■□□□□ 0.83
CLNS1AP54105 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CLNS1AP54105 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CLNS1AP54105 FZD10-202ENST00000539839 3282 ntBASIC20.21■□□□□ 0.83
CLNS1AP54105 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.2■□□□□ 0.82
CLNS1AP54105 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLNS1AP54105 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
CLNS1AP54105 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
CLNS1AP54105 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLNS1AP54105 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLNS1AP54105 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLNS1AP54105 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLNS1AP54105 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLNS1AP54105 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.2■□□□□ 0.82
CLNS1AP54105 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.2■□□□□ 0.82
CLNS1AP54105 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLNS1AP54105 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.2■□□□□ 0.82
CLNS1AP54105 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLNS1AP54105 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLNS1AP54105 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.2■□□□□ 0.82
CLNS1AP54105 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLNS1AP54105 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLNS1AP54105 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CLNS1AP54105 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CLNS1AP54105 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CLNS1AP54105 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CLNS1AP54105 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CLNS1AP54105 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CLNS1AP54105 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 AP006587.3-201ENST00000525742 1516 ntBASIC20.19■□□□□ 0.82
CLNS1AP54105 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.19■□□□□ 0.82
CLNS1AP54105 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.19■□□□□ 0.82
CLNS1AP54105 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.19■□□□□ 0.82
CLNS1AP54105 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 AC090340.1-201ENST00000620778 4980 ntBASIC20.19■□□□□ 0.82
CLNS1AP54105 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLNS1AP54105 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.18■□□□□ 0.82
CLNS1AP54105 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CLNS1AP54105 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CLNS1AP54105 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLNS1AP54105 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLNS1AP54105 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLNS1AP54105 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms