Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB5CP51148 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAB5CP51148 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAB5CP51148 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.41■□□□□ 0.22
RAB5CP51148 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RAB5CP51148 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB5CP51148 AC125437.2-201ENST00000625180 2167 ntBASIC16.41■□□□□ 0.22
RAB5CP51148 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB5CP51148 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB5CP51148 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB5CP51148 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5CP51148 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5CP51148 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5CP51148 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB5CP51148 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5CP51148 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5CP51148 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5CP51148 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RAB5CP51148 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5CP51148 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
RAB5CP51148 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB5CP51148 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5CP51148 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RAB5CP51148 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5CP51148 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB5CP51148 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB5CP51148 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.4■□□□□ 0.22
RAB5CP51148 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5CP51148 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5CP51148 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.4■□□□□ 0.22
RAB5CP51148 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5CP51148 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
RAB5CP51148 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RAB5CP51148 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5CP51148 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB5CP51148 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB5CP51148 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5CP51148 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5CP51148 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
RAB5CP51148 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5CP51148 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
RAB5CP51148 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5CP51148 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5CP51148 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RAB5CP51148 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5CP51148 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
RAB5CP51148 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAB5CP51148 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RAB5CP51148 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5CP51148 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RAB5CP51148 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RAB5CP51148 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5CP51148 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAB5CP51148 AC139795.1-202ENST00000500444 432 ntBASIC16.39■□□□□ 0.21
RAB5CP51148 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB5CP51148 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RAB5CP51148 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5CP51148 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAB5CP51148 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5CP51148 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5CP51148 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5CP51148 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB5CP51148 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5CP51148 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB5CP51148 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5CP51148 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RAB5CP51148 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RAB5CP51148 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5CP51148 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5CP51148 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5CP51148 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5CP51148 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5CP51148 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.38■□□□□ 0.21
RAB5CP51148 AC087239.1-201ENST00000622671 572 ntBASIC16.38■□□□□ 0.21
RAB5CP51148 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5CP51148 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5CP51148 AIRN-201ENST00000601203 4374 ntBASIC16.38■□□□□ 0.21
RAB5CP51148 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5CP51148 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RAB5CP51148 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5CP51148 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RAB5CP51148 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB5CP51148 AC009102.2-201ENST00000606772 1639 ntBASIC16.37■□□□□ 0.21
RAB5CP51148 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB5CP51148 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB5CP51148 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB5CP51148 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB5CP51148 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB5CP51148 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB5CP51148 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB5CP51148 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB5CP51148 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.37■□□□□ 0.21
RAB5CP51148 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB5CP51148 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB5CP51148 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB5CP51148 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB5CP51148 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
RAB5CP51148 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB5CP51148 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.37■□□□□ 0.21
RAB5CP51148 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms