Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SLC1A6P48664 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC1A6P48664 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.05■□□□□ 0.8
SLC1A6P48664 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC1A6P48664 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A6P48664 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A6P48664 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A6P48664 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A6P48664 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A6P48664 AC125437.2-201ENST00000625180 2167 ntBASIC20.05■□□□□ 0.8
SLC1A6P48664 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
SLC1A6P48664 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A6P48664 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A6P48664 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A6P48664 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC1A6P48664 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A6P48664 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A6P48664 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A6P48664 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A6P48664 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A6P48664 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC1A6P48664 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A6P48664 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SLC1A6P48664 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A6P48664 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A6P48664 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC1A6P48664 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.04■□□□□ 0.8
SLC1A6P48664 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SLC1A6P48664 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.04■□□□□ 0.8
SLC1A6P48664 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SLC1A6P48664 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A6P48664 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A6P48664 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SLC1A6P48664 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A6P48664 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A6P48664 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A6P48664 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC1A6P48664 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A6P48664 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC1A6P48664 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC1A6P48664 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC1A6P48664 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A6P48664 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC1A6P48664 AC008175.2-201ENST00000612840 297 ntBASIC20.03■□□□□ 0.8
SLC1A6P48664 RARRES2P11-201ENST00000635158 484 ntBASIC20.03■□□□□ 0.8
SLC1A6P48664 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SLC1A6P48664 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC1A6P48664 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SLC1A6P48664 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A6P48664 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A6P48664 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A6P48664 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A6P48664 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A6P48664 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A6P48664 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.03■□□□□ 0.8
SLC1A6P48664 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A6P48664 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A6P48664 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A6P48664 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A6P48664 AL158211.5-201ENST00000623583 2518 ntBASIC20.02■□□□□ 0.8
SLC1A6P48664 MIR572-201ENST00000384983 95 ntBASIC20.02■□□□□ 0.8
SLC1A6P48664 POU5F1P4-201ENST00000413175 1085 ntBASIC20.02■□□□□ 0.8
SLC1A6P48664 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A6P48664 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SLC1A6P48664 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
SLC1A6P48664 MIR2861-201ENST00000636310 90 ntBASIC20.02■□□□□ 0.8
SLC1A6P48664 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.02■□□□□ 0.8
SLC1A6P48664 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A6P48664 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.02■□□□□ 0.8
SLC1A6P48664 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A6P48664 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A6P48664 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC1A6P48664 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SLC1A6P48664 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.02■□□□□ 0.79
SLC1A6P48664 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.02■□□□□ 0.79
SLC1A6P48664 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC1A6P48664 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A6P48664 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SLC1A6P48664 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A6P48664 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A6P48664 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC1A6P48664 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.01■□□□□ 0.79
SLC1A6P48664 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A6P48664 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SLC1A6P48664 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A6P48664 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.01■□□□□ 0.79
SLC1A6P48664 AC027682.1-201ENST00000562846 899 ntBASIC20.01■□□□□ 0.79
SLC1A6P48664 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC1A6P48664 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A6P48664 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.01■□□□□ 0.79
SLC1A6P48664 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A6P48664 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A6P48664 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A6P48664 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SLC1A6P48664 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC1A6P48664 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A6P48664 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20■□□□□ 0.79
SLC1A6P48664 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SLC1A6P48664 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SLC1A6P48664 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms