Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
GABRA4P48169 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRA4P48169 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GABRA4P48169 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRA4P48169 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRA4P48169 ESRRAP1-201ENST00000400596 1257 ntBASIC19.41■□□□□ 0.7
GABRA4P48169 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
GABRA4P48169 FAM201B-201ENST00000458407 597 ntBASIC19.41■□□□□ 0.7
GABRA4P48169 PNMA6B-201ENST00000538162 1200 ntBASIC19.41■□□□□ 0.7
GABRA4P48169 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.41■□□□□ 0.7
GABRA4P48169 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
GABRA4P48169 AC008403.3-201ENST00000598924 454 ntBASIC19.41■□□□□ 0.7
GABRA4P48169 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.41■□□□□ 0.7
GABRA4P48169 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRA4P48169 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.41■□□□□ 0.7
GABRA4P48169 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRA4P48169 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
GABRA4P48169 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRA4P48169 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GABRA4P48169 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.41■□□□□ 0.7
GABRA4P48169 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.41■□□□□ 0.7
GABRA4P48169 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRA4P48169 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRA4P48169 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.41■□□□□ 0.7
GABRA4P48169 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABRA4P48169 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABRA4P48169 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.4■□□□□ 0.7
GABRA4P48169 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.4■□□□□ 0.7
GABRA4P48169 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GABRA4P48169 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.4■□□□□ 0.7
GABRA4P48169 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
GABRA4P48169 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
GABRA4P48169 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABRA4P48169 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABRA4P48169 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABRA4P48169 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
GABRA4P48169 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.4■□□□□ 0.7
GABRA4P48169 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GABRA4P48169 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GABRA4P48169 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.4■□□□□ 0.7
GABRA4P48169 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.4■□□□□ 0.7
GABRA4P48169 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
GABRA4P48169 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABRA4P48169 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
GABRA4P48169 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABRA4P48169 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABRA4P48169 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABRA4P48169 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
GABRA4P48169 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GABRA4P48169 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GABRA4P48169 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.39■□□□□ 0.69
GABRA4P48169 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.39■□□□□ 0.69
GABRA4P48169 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.39■□□□□ 0.69
GABRA4P48169 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.39■□□□□ 0.69
GABRA4P48169 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GABRA4P48169 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.39■□□□□ 0.69
GABRA4P48169 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GABRA4P48169 ITM2C-210ENST00000620962 501 ntBASIC19.39■□□□□ 0.69
GABRA4P48169 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
GABRA4P48169 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABRA4P48169 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABRA4P48169 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABRA4P48169 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GABRA4P48169 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
GABRA4P48169 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GABRA4P48169 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABRA4P48169 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABRA4P48169 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABRA4P48169 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABRA4P48169 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GABRA4P48169 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GABRA4P48169 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
GABRA4P48169 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABRA4P48169 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABRA4P48169 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABRA4P48169 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABRA4P48169 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABRA4P48169 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
GABRA4P48169 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.38■□□□□ 0.69
GABRA4P48169 AC026366.1-201ENST00000488803 879 ntBASIC19.38■□□□□ 0.69
GABRA4P48169 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.38■□□□□ 0.69
GABRA4P48169 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.38■□□□□ 0.69
GABRA4P48169 AC092368.3-202ENST00000574180 1591 ntBASIC19.38■□□□□ 0.69
GABRA4P48169 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABRA4P48169 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GABRA4P48169 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.37■□□□□ 0.69
GABRA4P48169 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.37■□□□□ 0.69
GABRA4P48169 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GABRA4P48169 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GABRA4P48169 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GABRA4P48169 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
GABRA4P48169 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.37■□□□□ 0.69
GABRA4P48169 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GABRA4P48169 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GABRA4P48169 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GABRA4P48169 AP003097.1-201ENST00000530657 1135 ntBASIC19.37■□□□□ 0.69
GABRA4P48169 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.37■□□□□ 0.69
GABRA4P48169 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.37■□□□□ 0.69
GABRA4P48169 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GABRA4P48169 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms