Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX5P45973 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX5P45973 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX5P45973 AL162377.1-201ENST00000618844 1793 ntBASIC17.51■□□□□ 0.39
CBX5P45973 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX5P45973 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CBX5P45973 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX5P45973 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.5■□□□□ 0.39
CBX5P45973 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CBX5P45973 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CBX5P45973 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.5■□□□□ 0.39
CBX5P45973 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX5P45973 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX5P45973 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX5P45973 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.5■□□□□ 0.39
CBX5P45973 SLC47A1P1-202ENST00000449666 945 ntBASIC17.5■□□□□ 0.39
CBX5P45973 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.5■□□□□ 0.39
CBX5P45973 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.5■□□□□ 0.39
CBX5P45973 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.5■□□□□ 0.39
CBX5P45973 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX5P45973 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CBX5P45973 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX5P45973 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.5■□□□□ 0.39
CBX5P45973 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.5■□□□□ 0.39
CBX5P45973 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX5P45973 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX5P45973 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CBX5P45973 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX5P45973 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX5P45973 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.5■□□□□ 0.39
CBX5P45973 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.5■□□□□ 0.39
CBX5P45973 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CBX5P45973 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX5P45973 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX5P45973 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX5P45973 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CBX5P45973 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CBX5P45973 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX5P45973 AC009237.3-201ENST00000393279 1427 ntBASIC17.49■□□□□ 0.39
CBX5P45973 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX5P45973 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX5P45973 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX5P45973 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX5P45973 SERBP1P1-201ENST00000396021 1160 ntBASIC17.49■□□□□ 0.39
CBX5P45973 SMUG1P1-201ENST00000590640 811 ntBASIC17.49■□□□□ 0.39
CBX5P45973 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX5P45973 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX5P45973 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX5P45973 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX5P45973 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX5P45973 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.49■□□□□ 0.39
CBX5P45973 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.49■□□□□ 0.39
CBX5P45973 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
CBX5P45973 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX5P45973 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX5P45973 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CBX5P45973 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
CBX5P45973 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX5P45973 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX5P45973 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.48■□□□□ 0.39
CBX5P45973 FP700111.2-201ENST00000619190 1892 ntBASIC17.48■□□□□ 0.39
CBX5P45973 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.48■□□□□ 0.39
CBX5P45973 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CBX5P45973 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.48■□□□□ 0.39
CBX5P45973 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.48■□□□□ 0.39
CBX5P45973 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.48■□□□□ 0.39
CBX5P45973 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CBX5P45973 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
CBX5P45973 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CBX5P45973 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.48■□□□□ 0.39
CBX5P45973 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.48■□□□□ 0.39
CBX5P45973 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CBX5P45973 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CBX5P45973 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.48■□□□□ 0.39
CBX5P45973 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CBX5P45973 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX5P45973 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX5P45973 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX5P45973 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX5P45973 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX5P45973 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.47■□□□□ 0.39
CBX5P45973 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX5P45973 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms