Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTSKP43235 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.32■□□□□ 0.84
CTSKP43235 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTSKP43235 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSKP43235 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CTSKP43235 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
CTSKP43235 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CTSKP43235 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTSKP43235 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CTSKP43235 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSKP43235 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.32■□□□□ 0.84
CTSKP43235 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.32■□□□□ 0.84
CTSKP43235 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.32■□□□□ 0.84
CTSKP43235 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSKP43235 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTSKP43235 SOX15-203ENST00000570788 1093 ntBASIC20.32■□□□□ 0.84
CTSKP43235 FAM197Y4-202ENST00000622692 608 ntBASIC20.32■□□□□ 0.84
CTSKP43235 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.32■□□□□ 0.84
CTSKP43235 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTSKP43235 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTSKP43235 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSKP43235 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSKP43235 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSKP43235 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSKP43235 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.31■□□□□ 0.84
CTSKP43235 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.31■□□□□ 0.84
CTSKP43235 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.31■□□□□ 0.84
CTSKP43235 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTSKP43235 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CTSKP43235 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTSKP43235 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTSKP43235 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTSKP43235 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.31■□□□□ 0.84
CTSKP43235 MIR718-201ENST00000390190 70 ntBASIC20.31■□□□□ 0.84
CTSKP43235 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTSKP43235 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.31■□□□□ 0.84
CTSKP43235 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTSKP43235 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.31■□□□□ 0.84
CTSKP43235 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.31■□□□□ 0.84
CTSKP43235 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.31■□□□□ 0.84
CTSKP43235 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTSKP43235 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.31■□□□□ 0.84
CTSKP43235 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CTSKP43235 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.31■□□□□ 0.84
CTSKP43235 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CTSKP43235 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.3■□□□□ 0.84
CTSKP43235 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.3■□□□□ 0.84
CTSKP43235 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.3■□□□□ 0.84
CTSKP43235 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.3■□□□□ 0.84
CTSKP43235 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.3■□□□□ 0.84
CTSKP43235 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.3■□□□□ 0.84
CTSKP43235 AC233263.1-201ENST00000578059 224 ntBASIC20.3■□□□□ 0.84
CTSKP43235 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
CTSKP43235 AC105020.6-201ENST00000621523 1217 ntBASIC20.3■□□□□ 0.84
CTSKP43235 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
CTSKP43235 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.3■□□□□ 0.84
CTSKP43235 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.3■□□□□ 0.84
CTSKP43235 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSKP43235 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTSKP43235 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.29■□□□□ 0.84
CTSKP43235 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTSKP43235 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTSKP43235 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTSKP43235 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.29■□□□□ 0.84
CTSKP43235 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.29■□□□□ 0.84
CTSKP43235 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.29■□□□□ 0.84
CTSKP43235 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.29■□□□□ 0.84
CTSKP43235 AC069544.1-201ENST00000609399 999 ntBASIC20.29■□□□□ 0.84
CTSKP43235 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTSKP43235 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CTSKP43235 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.29■□□□□ 0.84
CTSKP43235 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSKP43235 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSKP43235 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.28■□□□□ 0.84
CTSKP43235 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSKP43235 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.28■□□□□ 0.84
CTSKP43235 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSKP43235 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CTSKP43235 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTSKP43235 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.28■□□□□ 0.84
CTSKP43235 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms