Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 PEP8YJL053W 1140 nt1.59□□□□□ -2.15
SSH1P38353 YKR075W-AYKR075W-A 270 nt1.59□□□□□ -2.15
SSH1P38353 ATP18YML081C-A 180 nt1.59□□□□□ -2.15
SSH1P38353 YMR052C-AYMR052C-A 366 nt1.59□□□□□ -2.15
SSH1P38353 YMR272W-BYMR272W-B 108 nt1.59□□□□□ -2.15
SSH1P38353 BFA1YJR053W 1725 nt1.59□□□□□ -2.16
SSH1P38353 GAL80YML051W 1308 nt1.59□□□□□ -2.16
SSH1P38353 RTP1YMR185W 2946 nt1.58□□□□□ -2.16
SSH1P38353 AHC2YCR082W 387 nt1.58□□□□□ -2.16
SSH1P38353 YDL009CYDL009C 324 nt1.58□□□□□ -2.16
SSH1P38353 YDR286CYDR286C 345 nt1.58□□□□□ -2.16
SSH1P38353 YER068C-AYER068C-A 432 nt1.58□□□□□ -2.16
SSH1P38353 YML084WYML084W 309 nt1.58□□□□□ -2.16
SSH1P38353 OST2YOR103C 393 nt1.58□□□□□ -2.16
SSH1P38353 YCL002CYCL002C 792 nt1.58□□□□□ -2.16
SSH1P38353 MGR1YCL044C 1254 nt1.58□□□□□ -2.16
SSH1P38353 YOR093CYOR093C 4947 nt1.58□□□□□ -2.16
SSH1P38353 PEP1YBL017C 4740 nt1.58□□□□□ -2.16
SSH1P38353 FAB1YFR019W 6837 nt1.57□□□□□ -2.16
SSH1P38353 SBE22YHR103W 2559 nt1.57□□□□□ -2.16
SSH1P38353 NCL1YBL024W 2055 nt1.57□□□□□ -2.16
SSH1P38353 LEU3YLR451W 2661 nt1.57□□□□□ -2.16
SSH1P38353 CHC1YGL206C 4962 nt1.57□□□□□ -2.16
SSH1P38353 YDL025W-AYDL025W-A 105 nt1.57□□□□□ -2.16
SSH1P38353 YDR018CYDR018C 1191 nt1.57□□□□□ -2.16
SSH1P38353 UBC5YDR059C 447 nt1.57□□□□□ -2.16
SSH1P38353 RPL29YFR032C-A 180 nt1.57□□□□□ -2.16
SSH1P38353 RAD6YGL058W 519 nt1.57□□□□□ -2.16
SSH1P38353 SEC28YIL076W 891 nt1.57□□□□□ -2.16
SSH1P38353 YJL127C-BYJL127C-B 159 nt1.57□□□□□ -2.16
SSH1P38353 YJL147CYJL147C 1149 nt1.57□□□□□ -2.16
SSH1P38353 TAP42YMR028W 1101 nt1.57□□□□□ -2.16
SSH1P38353 YJL070CYJL070C 2667 nt1.57□□□□□ -2.16
SSH1P38353 IRC10YOL015W 1761 nt1.57□□□□□ -2.16
SSH1P38353 TBS1YBR150C 3285 nt1.57□□□□□ -2.16
SSH1P38353 VPS15YBR097W 4365 nt1.56□□□□□ -2.16
SSH1P38353 YDR537CYDR537C 606 nt1.56□□□□□ -2.16
SSH1P38353 MND1YGL183C 660 nt1.56□□□□□ -2.16
SSH1P38353 LAG1YHL003C 1236 nt1.56□□□□□ -2.16
SSH1P38353 RPI1YIL119C 1224 nt1.56□□□□□ -2.16
SSH1P38353 IST3YIR005W 447 nt1.56□□□□□ -2.16
SSH1P38353 SDS22YKL193C 1017 nt1.56□□□□□ -2.16
SSH1P38353 YOR364WYOR364W 369 nt1.56□□□□□ -2.16
SSH1P38353 YBR063CYBR063C 1215 nt1.56□□□□□ -2.16
SSH1P38353 RPB5YBR154C 648 nt1.56□□□□□ -2.16
SSH1P38353 YCL023CYCL023C 348 nt1.56□□□□□ -2.16
SSH1P38353 BRO1YPL084W 2535 nt1.55□□□□□ -2.16
SSH1P38353 CDC50YCR094W 1176 nt1.55□□□□□ -2.16
SSH1P38353 RPL37BYDR500C 267 nt1.55□□□□□ -2.16
SSH1P38353 TPM2YIL138C 486 nt1.55□□□□□ -2.16
SSH1P38353 GRX8YLR364W 330 nt1.55□□□□□ -2.16
SSH1P38353 YMR304C-AYMR304C-A 351 nt1.55□□□□□ -2.16
SSH1P38353 ATP15YPL271W 189 nt1.55□□□□□ -2.16
SSH1P38353 ATP20YPR020W 348 nt1.55□□□□□ -2.16
SSH1P38353 SOK2YMR016C 2358 nt1.55□□□□□ -2.16
SSH1P38353 YGL014C-AYGL014C-A 162 nt1.54□□□□□ -2.16
SSH1P38353 SPO11YHL022C 1197 nt1.54□□□□□ -2.16
SSH1P38353 YNL050CYNL050C 813 nt1.54□□□□□ -2.16
SSH1P38353 YNL150WYNL150W 408 nt1.54□□□□□ -2.16
SSH1P38353 YOR105WYOR105W 327 nt1.54□□□□□ -2.16
SSH1P38353 UBP1YDL122W 2430 nt1.54□□□□□ -2.16
SSH1P38353 DFG10YIL049W 762 nt1.53□□□□□ -2.16
SSH1P38353 SPE1YKL184W 1401 nt1.53□□□□□ -2.16
SSH1P38353 TDA9YML081W 3756 nt1.53□□□□□ -2.16
SSH1P38353 ICY1YMR195W 384 nt1.53□□□□□ -2.16
SSH1P38353 SYH1YPL105C 2550 nt1.53□□□□□ -2.16
SSH1P38353 SPC72YAL047C 1869 nt1.52□□□□□ -2.17
SSH1P38353 CHS1YNL192W 3396 nt1.52□□□□□ -2.17
SSH1P38353 YER038W-AYER038W-A 381 nt1.52□□□□□ -2.17
SSH1P38353 BUD19YJL188C 309 nt1.52□□□□□ -2.17
SSH1P38353 TEN1YLR010C 483 nt1.52□□□□□ -2.17
SSH1P38353 YDR341CYDR341C 1824 nt1.52□□□□□ -2.17
SSH1P38353 RKM1YPL208W 1752 nt1.52□□□□□ -2.17
SSH1P38353 MYO4YAL029C 4416 nt1.52□□□□□ -2.17
SSH1P38353 YGR109W-BYGR109W-B 4644 nt1.51□□□□□ -2.17
SSH1P38353 CSE4YKL049C 690 nt1.51□□□□□ -2.17
SSH1P38353 YHC1YLR298C 696 nt1.51□□□□□ -2.17
SSH1P38353 YCL007CYCL007C 393 nt1.51□□□□□ -2.17
SSH1P38353 TFC8YPL007C 1767 nt1.51□□□□□ -2.17
SSH1P38353 STB4YMR019W 2850 nt1.51□□□□□ -2.17
SSH1P38353 DPB11YJL090C 2295 nt1.51□□□□□ -2.17
SSH1P38353 YFL002W-BYFL002W-B 1317 nt1.5□□□□□ -2.17
SSH1P38353 YGR161W-AYGR161W-A 1317 nt1.5□□□□□ -2.17
SSH1P38353 YBL100W-AYBL100W-A 1317 nt1.5□□□□□ -2.17
SSH1P38353 YCL020WYCL020W 1317 nt1.5□□□□□ -2.17
SSH1P38353 snR5snR5 204 nt1.5□□□□□ -2.17
SSH1P38353 YCR087C-AYCR087C-A 462 nt1.5□□□□□ -2.17
SSH1P38353 CMS1YLR003C 876 nt1.5□□□□□ -2.17
SSH1P38353 ARV1YLR242C 966 nt1.5□□□□□ -2.17
SSH1P38353 YOR394C-AYOR394C-A 168 nt1.5□□□□□ -2.17
SSH1P38353 ROX1YPR065W 1107 nt1.5□□□□□ -2.17
SSH1P38353 YBR174CYBR174C 315 nt1.5□□□□□ -2.17
SSH1P38353 YOR019WYOR019W 2193 nt1.49□□□□□ -2.17
SSH1P38353 SLM1YIL105C 2061 nt1.49□□□□□ -2.17
SSH1P38353 SWT1YOR166C 1377 nt1.49□□□□□ -2.17
SSH1P38353 GPM2YDL021W 936 nt1.49□□□□□ -2.17
SSH1P38353 YDL062WYDL062W 426 nt1.49□□□□□ -2.17
SSH1P38353 YHR054CYHR054C 1065 nt1.49□□□□□ -2.17
SSH1P38353 YLR031WYLR031W 561 nt1.49□□□□□ -2.17
SSH1P38353 YMR230W-AYMR230W-A 189 nt1.49□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 25.3 ms