Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCK1P35558 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCK1P35558 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCK1P35558 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.43■■□□□ 1.02
PCK1P35558 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.43■■□□□ 1.02
PCK1P35558 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCK1P35558 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.43■■□□□ 1.02
PCK1P35558 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCK1P35558 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCK1P35558 AC073314.1-201ENST00000568729 2216 ntBASIC21.43■■□□□ 1.02
PCK1P35558 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCK1P35558 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
PCK1P35558 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCK1P35558 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.43■■□□□ 1.02
PCK1P35558 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.43■■□□□ 1.02
PCK1P35558 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.43■■□□□ 1.02
PCK1P35558 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCK1P35558 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCK1P35558 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCK1P35558 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.43■■□□□ 1.02
PCK1P35558 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCK1P35558 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCK1P35558 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
PCK1P35558 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCK1P35558 LINC01006-201ENST00000333319 2292 ntBASIC21.43■■□□□ 1.02
PCK1P35558 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
PCK1P35558 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCK1P35558 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.42■■□□□ 1.02
PCK1P35558 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCK1P35558 AC007322.3-201ENST00000426526 701 ntBASIC21.42■■□□□ 1.02
PCK1P35558 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCK1P35558 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
PCK1P35558 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.42■■□□□ 1.02
PCK1P35558 AC137761.2-201ENST00000561729 223 ntBASIC21.42■■□□□ 1.02
PCK1P35558 AC145350.3-201ENST00000569033 163 ntBASIC21.42■■□□□ 1.02
PCK1P35558 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCK1P35558 AC010536.3-201ENST00000620306 533 ntBASIC21.42■■□□□ 1.02
PCK1P35558 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCK1P35558 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCK1P35558 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PCK1P35558 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
PCK1P35558 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCK1P35558 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCK1P35558 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCK1P35558 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PCK1P35558 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PCK1P35558 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCK1P35558 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCK1P35558 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCK1P35558 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCK1P35558 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.41■■□□□ 1.02
PCK1P35558 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
PCK1P35558 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCK1P35558 TERF1P5-201ENST00000477545 1207 ntBASIC21.41■■□□□ 1.02
PCK1P35558 MIR5787-201ENST00000611784 55 ntBASIC21.41■■□□□ 1.02
PCK1P35558 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCK1P35558 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCK1P35558 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.41■■□□□ 1.02
PCK1P35558 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.41■■□□□ 1.02
PCK1P35558 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCK1P35558 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCK1P35558 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCK1P35558 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.4■■□□□ 1.02
PCK1P35558 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCK1P35558 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
PCK1P35558 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.4■■□□□ 1.02
PCK1P35558 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCK1P35558 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCK1P35558 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PCK1P35558 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCK1P35558 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCK1P35558 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCK1P35558 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCK1P35558 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.4■■□□□ 1.02
PCK1P35558 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.4■■□□□ 1.02
PCK1P35558 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.4■■□□□ 1.02
PCK1P35558 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
PCK1P35558 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.4■■□□□ 1.02
PCK1P35558 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCK1P35558 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCK1P35558 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCK1P35558 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PCK1P35558 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
PCK1P35558 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCK1P35558 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.39■■□□□ 1.02
PCK1P35558 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
PCK1P35558 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCK1P35558 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.39■■□□□ 1.01
PCK1P35558 CDV3P1-201ENST00000471403 739 ntBASIC21.39■■□□□ 1.01
PCK1P35558 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.39■■□□□ 1.01
PCK1P35558 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.39■■□□□ 1.01
PCK1P35558 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
PCK1P35558 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.39■■□□□ 1.01
PCK1P35558 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.39■■□□□ 1.01
PCK1P35558 MIR2861-201ENST00000636310 90 ntBASIC21.39■■□□□ 1.01
PCK1P35558 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCK1P35558 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PCK1P35558 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCK1P35558 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PCK1P35558 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms