Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CKS2P33552 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CKS2P33552 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.01□□□□□ -0.01
CKS2P33552 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CKS2P33552 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.01□□□□□ -0.01
CKS2P33552 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CKS2P33552 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CKS2P33552 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.01□□□□□ -0.01
CKS2P33552 ABHD17AP5-201ENST00000580133 923 ntBASIC15.01□□□□□ -0.01
CKS2P33552 AC092028.1-203ENST00000608262 953 ntBASIC15.01□□□□□ -0.01
CKS2P33552 AL117332.1-201ENST00000622628 974 ntBASIC15.01□□□□□ -0.01
CKS2P33552 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CKS2P33552 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CKS2P33552 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CKS2P33552 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CKS2P33552 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CKS2P33552 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CKS2P33552 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CKS2P33552 HTR7P1-202ENST00000624664 4411 ntBASIC15.01□□□□□ -0.01
CKS2P33552 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CKS2P33552 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CKS2P33552 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CKS2P33552 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CKS2P33552 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15□□□□□ -0.01
CKS2P33552 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CKS2P33552 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15□□□□□ -0.01
CKS2P33552 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CKS2P33552 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CKS2P33552 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15□□□□□ -0.01
CKS2P33552 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CKS2P33552 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15□□□□□ -0.01
CKS2P33552 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15□□□□□ -0.01
CKS2P33552 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15□□□□□ -0.01
CKS2P33552 AP006587.3-201ENST00000525742 1516 ntBASIC15□□□□□ -0.01
CKS2P33552 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15□□□□□ -0.01
CKS2P33552 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15□□□□□ -0.01
CKS2P33552 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CKS2P33552 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15□□□□□ -0.01
CKS2P33552 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CKS2P33552 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CKS2P33552 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CKS2P33552 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CKS2P33552 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS2P33552 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.99□□□□□ -0.01
CKS2P33552 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS2P33552 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS2P33552 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS2P33552 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CKS2P33552 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CKS2P33552 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC14.99□□□□□ -0.01
CKS2P33552 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC14.99□□□□□ -0.01
CKS2P33552 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CKS2P33552 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS2P33552 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS2P33552 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS2P33552 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CKS2P33552 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS2P33552 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.99□□□□□ -0.01
CKS2P33552 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS2P33552 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS2P33552 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CKS2P33552 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.99□□□□□ -0.01
CKS2P33552 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.99□□□□□ -0.01
CKS2P33552 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CKS2P33552 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.98□□□□□ -0.01
CKS2P33552 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS2P33552 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS2P33552 AP000974.1-201ENST00000623909 2387 ntBASIC14.98□□□□□ -0.01
CKS2P33552 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS2P33552 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.98□□□□□ -0.01
CKS2P33552 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS2P33552 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS2P33552 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS2P33552 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.98□□□□□ -0.01
CKS2P33552 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.98□□□□□ -0.01
CKS2P33552 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CKS2P33552 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC14.98□□□□□ -0.01
CKS2P33552 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS2P33552 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC14.98□□□□□ -0.01
CKS2P33552 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CKS2P33552 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CKS2P33552 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CKS2P33552 EXOG-217ENST00000630638 197 ntTSL 5 BASIC14.98□□□□□ -0.01
CKS2P33552 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS2P33552 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS2P33552 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.98□□□□□ -0.01
CKS2P33552 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS2P33552 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS2P33552 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CKS2P33552 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS2P33552 TCF3P1-201ENST00000423021 1937 ntBASIC14.98□□□□□ -0.01
CKS2P33552 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.98□□□□□ -0.01
CKS2P33552 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CKS2P33552 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.97□□□□□ -0.01
CKS2P33552 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS2P33552 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.97□□□□□ -0.01
CKS2P33552 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CKS2P33552 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.97□□□□□ -0.01
CKS2P33552 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS2P33552 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms