Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN6P29350 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN6P29350 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.38■□□□□ 0.69
PTPN6P29350 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPN6P29350 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.38■□□□□ 0.69
PTPN6P29350 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN6P29350 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN6P29350 AC092437.1-201ENST00000624794 1048 ntBASIC19.38■□□□□ 0.69
PTPN6P29350 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN6P29350 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PTPN6P29350 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN6P29350 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PTPN6P29350 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPN6P29350 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPN6P29350 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PTPN6P29350 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN6P29350 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN6P29350 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN6P29350 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN6P29350 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPN6P29350 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN6P29350 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPN6P29350 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPN6P29350 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPN6P29350 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.37■□□□□ 0.69
PTPN6P29350 AC104187.1-201ENST00000607510 612 ntBASIC19.37■□□□□ 0.69
PTPN6P29350 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPN6P29350 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN6P29350 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.36■□□□□ 0.69
PTPN6P29350 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.36■□□□□ 0.69
PTPN6P29350 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN6P29350 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PTPN6P29350 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN6P29350 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.36■□□□□ 0.69
PTPN6P29350 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN6P29350 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN6P29350 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
PTPN6P29350 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN6P29350 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PTPN6P29350 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN6P29350 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.36■□□□□ 0.69
PTPN6P29350 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPN6P29350 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN6P29350 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN6P29350 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPN6P29350 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN6P29350 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PTPN6P29350 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PTPN6P29350 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN6P29350 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.35■□□□□ 0.69
PTPN6P29350 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN6P29350 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN6P29350 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.35■□□□□ 0.69
PTPN6P29350 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPN6P29350 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.35■□□□□ 0.69
PTPN6P29350 AC137761.2-201ENST00000561729 223 ntBASIC19.35■□□□□ 0.69
PTPN6P29350 AC145350.3-201ENST00000569033 163 ntBASIC19.35■□□□□ 0.69
PTPN6P29350 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.35■□□□□ 0.69
PTPN6P29350 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN6P29350 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPN6P29350 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN6P29350 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN6P29350 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN6P29350 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN6P29350 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PTPN6P29350 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PTPN6P29350 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPN6P29350 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN6P29350 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PTPN6P29350 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN6P29350 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN6P29350 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN6P29350 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN6P29350 AC010141.2-201ENST00000452426 721 ntBASIC19.34■□□□□ 0.69
PTPN6P29350 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN6P29350 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.34■□□□□ 0.69
PTPN6P29350 AL137784.2-201ENST00000607332 1000 ntBASIC19.34■□□□□ 0.69
PTPN6P29350 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN6P29350 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN6P29350 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PTPN6P29350 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN6P29350 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PTPN6P29350 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN6P29350 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN6P29350 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN6P29350 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN6P29350 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN6P29350 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN6P29350 AC092720.2-201ENST00000602388 1665 ntBASIC19.33■□□□□ 0.69
PTPN6P29350 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN6P29350 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN6P29350 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN6P29350 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PTPN6P29350 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.69
PTPN6P29350 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.33■□□□□ 0.68
PTPN6P29350 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.33■□□□□ 0.68
PTPN6P29350 AC006015.1-201ENST00000429970 570 ntBASIC19.33■□□□□ 0.68
PTPN6P29350 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.33■□□□□ 0.68
PTPN6P29350 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
PTPN6P29350 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms