Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO1P25800 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LMO1P25800 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LMO1P25800 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LMO1P25800 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO1P25800 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.14■□□□□ 0.33
LMO1P25800 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.14■□□□□ 0.33
LMO1P25800 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.14■□□□□ 0.33
LMO1P25800 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.14■□□□□ 0.33
LMO1P25800 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.14■□□□□ 0.33
LMO1P25800 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.14■□□□□ 0.33
LMO1P25800 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO1P25800 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO1P25800 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO1P25800 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.14■□□□□ 0.33
LMO1P25800 CDV3P1-201ENST00000471403 739 ntBASIC17.14■□□□□ 0.33
LMO1P25800 TERF1P5-201ENST00000477545 1207 ntBASIC17.14■□□□□ 0.33
LMO1P25800 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.14■□□□□ 0.33
LMO1P25800 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LMO1P25800 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.14■□□□□ 0.33
LMO1P25800 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO1P25800 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO1P25800 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO1P25800 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO1P25800 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LMO1P25800 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
LMO1P25800 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LMO1P25800 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LMO1P25800 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LMO1P25800 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LMO1P25800 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.13■□□□□ 0.33
LMO1P25800 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LMO1P25800 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.13■□□□□ 0.33
LMO1P25800 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LMO1P25800 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LMO1P25800 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.13■□□□□ 0.33
LMO1P25800 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LMO1P25800 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.13■□□□□ 0.33
LMO1P25800 KRT18P5-201ENST00000436075 1291 ntBASIC17.13■□□□□ 0.33
LMO1P25800 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.13■□□□□ 0.33
LMO1P25800 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.13■□□□□ 0.33
LMO1P25800 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
LMO1P25800 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.13■□□□□ 0.33
LMO1P25800 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.13■□□□□ 0.33
LMO1P25800 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.13■□□□□ 0.33
LMO1P25800 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LMO1P25800 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.13■□□□□ 0.33
LMO1P25800 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LMO1P25800 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.13■□□□□ 0.33
LMO1P25800 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LMO1P25800 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LMO1P25800 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LMO1P25800 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LMO1P25800 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LMO1P25800 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.13■□□□□ 0.33
LMO1P25800 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LMO1P25800 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LMO1P25800 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LMO1P25800 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO1P25800 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO1P25800 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LMO1P25800 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LMO1P25800 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LMO1P25800 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LMO1P25800 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.12■□□□□ 0.33
LMO1P25800 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.12■□□□□ 0.33
LMO1P25800 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO1P25800 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LMO1P25800 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.12■□□□□ 0.33
LMO1P25800 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.12■□□□□ 0.33
LMO1P25800 AL162412.1-201ENST00000567129 965 ntBASIC17.12■□□□□ 0.33
LMO1P25800 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.12■□□□□ 0.33
LMO1P25800 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.12■□□□□ 0.33
LMO1P25800 AC010536.3-201ENST00000620306 533 ntBASIC17.12■□□□□ 0.33
LMO1P25800 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.12■□□□□ 0.33
LMO1P25800 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LMO1P25800 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LMO1P25800 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.12■□□□□ 0.33
LMO1P25800 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.12■□□□□ 0.33
LMO1P25800 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
LMO1P25800 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.12■□□□□ 0.33
LMO1P25800 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO1P25800 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LMO1P25800 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO1P25800 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LMO1P25800 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.11■□□□□ 0.33
LMO1P25800 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO1P25800 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO1P25800 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO1P25800 AL162377.1-201ENST00000618844 1793 ntBASIC17.11■□□□□ 0.33
LMO1P25800 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.11■□□□□ 0.33
LMO1P25800 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMO1P25800 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.11■□□□□ 0.33
LMO1P25800 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.11■□□□□ 0.33
LMO1P25800 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.11■□□□□ 0.33
LMO1P25800 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LMO1P25800 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
LMO1P25800 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LMO1P25800 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
LMO1P25800 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms