Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.59■□□□□ 0.41
CCL1P22362 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCL1P22362 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL1P22362 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.59■□□□□ 0.41
CCL1P22362 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL1P22362 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL1P22362 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCL1P22362 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.59■□□□□ 0.41
CCL1P22362 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CCL1P22362 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCL1P22362 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.59■□□□□ 0.41
CCL1P22362 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.59■□□□□ 0.41
CCL1P22362 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
CCL1P22362 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CCL1P22362 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.59■□□□□ 0.41
CCL1P22362 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL1P22362 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.59■□□□□ 0.41
CCL1P22362 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCL1P22362 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.59■□□□□ 0.41
CCL1P22362 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL1P22362 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.59■□□□□ 0.41
CCL1P22362 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
CCL1P22362 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CCL1P22362 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCL1P22362 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.58■□□□□ 0.41
CCL1P22362 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCL1P22362 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCL1P22362 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CCL1P22362 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.58■□□□□ 0.4
CCL1P22362 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.58■□□□□ 0.4
CCL1P22362 CDV3P1-201ENST00000471403 739 ntBASIC17.58■□□□□ 0.4
CCL1P22362 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCL1P22362 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCL1P22362 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCL1P22362 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.58■□□□□ 0.4
CCL1P22362 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.58■□□□□ 0.4
CCL1P22362 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCL1P22362 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCL1P22362 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCL1P22362 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCL1P22362 AFG3L1P-217ENST00000557444 2447 ntBASIC17.58■□□□□ 0.4
CCL1P22362 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.58■□□□□ 0.4
CCL1P22362 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCL1P22362 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CCL1P22362 SMG8-203ENST00000578922 2178 ntBASIC17.57■□□□□ 0.4
CCL1P22362 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCL1P22362 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.57■□□□□ 0.4
CCL1P22362 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.57■□□□□ 0.4
CCL1P22362 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CCL1P22362 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCL1P22362 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCL1P22362 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCL1P22362 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCL1P22362 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL1P22362 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL1P22362 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL1P22362 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL1P22362 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCL1P22362 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL1P22362 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.57■□□□□ 0.4
CCL1P22362 AC097381.1-201ENST00000429019 1296 ntBASIC17.57■□□□□ 0.4
CCL1P22362 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.57■□□□□ 0.4
CCL1P22362 UBE2DNL-204ENST00000602536 740 ntBASIC17.57■□□□□ 0.4
CCL1P22362 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCL1P22362 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
CCL1P22362 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL1P22362 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL1P22362 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL1P22362 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.57■□□□□ 0.4
CCL1P22362 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.57■□□□□ 0.4
CCL1P22362 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL1P22362 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.57■□□□□ 0.4
CCL1P22362 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL1P22362 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCL1P22362 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL1P22362 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.57■□□□□ 0.4
CCL1P22362 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCL1P22362 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCL1P22362 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL1P22362 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL1P22362 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL1P22362 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.56■□□□□ 0.4
CCL1P22362 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CCL1P22362 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.56■□□□□ 0.4
CCL1P22362 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.56■□□□□ 0.4
CCL1P22362 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.56■□□□□ 0.4
CCL1P22362 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.56■□□□□ 0.4
CCL1P22362 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL1P22362 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCL1P22362 MYCNOS-205ENST00000641950 531 ntBASIC17.56■□□□□ 0.4
CCL1P22362 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.56■□□□□ 0.4
CCL1P22362 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.56■□□□□ 0.4
CCL1P22362 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL1P22362 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL1P22362 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL1P22362 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL1P22362 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL1P22362 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CCL1P22362 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
CCL1P22362 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms