Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.31■□□□□ 0.84
BCKDHBP21953 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BCKDHBP21953 AC097493.4-201ENST00000641197 219 ntBASIC20.31■□□□□ 0.84
BCKDHBP21953 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BCKDHBP21953 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BCKDHBP21953 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BCKDHBP21953 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BCKDHBP21953 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHBP21953 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
BCKDHBP21953 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHBP21953 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHBP21953 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHBP21953 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
BCKDHBP21953 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHBP21953 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHBP21953 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHBP21953 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.3■□□□□ 0.84
BCKDHBP21953 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHBP21953 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.3■□□□□ 0.84
BCKDHBP21953 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.3■□□□□ 0.84
BCKDHBP21953 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
BCKDHBP21953 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
BCKDHBP21953 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
BCKDHBP21953 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHBP21953 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHBP21953 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHBP21953 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BCKDHBP21953 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCKDHBP21953 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCKDHBP21953 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BCKDHBP21953 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.29■□□□□ 0.84
BCKDHBP21953 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.29■□□□□ 0.84
BCKDHBP21953 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
BCKDHBP21953 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.29■□□□□ 0.84
BCKDHBP21953 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
BCKDHBP21953 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.29■□□□□ 0.84
BCKDHBP21953 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCKDHBP21953 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
BCKDHBP21953 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BCKDHBP21953 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
BCKDHBP21953 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCKDHBP21953 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCKDHBP21953 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BCKDHBP21953 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.28■□□□□ 0.84
BCKDHBP21953 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
BCKDHBP21953 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BCKDHBP21953 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.28■□□□□ 0.84
BCKDHBP21953 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCKDHBP21953 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.28■□□□□ 0.84
BCKDHBP21953 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.28■□□□□ 0.84
BCKDHBP21953 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.28■□□□□ 0.84
BCKDHBP21953 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.28■□□□□ 0.84
BCKDHBP21953 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCKDHBP21953 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCKDHBP21953 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCKDHBP21953 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCKDHBP21953 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BCKDHBP21953 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCKDHBP21953 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BCKDHBP21953 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.28■□□□□ 0.84
BCKDHBP21953 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCKDHBP21953 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCKDHBP21953 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCKDHBP21953 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCKDHBP21953 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
BCKDHBP21953 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCKDHBP21953 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.27■□□□□ 0.84
BCKDHBP21953 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCKDHBP21953 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCKDHBP21953 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.27■□□□□ 0.84
BCKDHBP21953 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
BCKDHBP21953 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCKDHBP21953 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
BCKDHBP21953 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
BCKDHBP21953 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
BCKDHBP21953 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BCKDHBP21953 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BCKDHBP21953 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BCKDHBP21953 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHBP21953 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.26■□□□□ 0.83
BCKDHBP21953 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.26■□□□□ 0.83
BCKDHBP21953 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHBP21953 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHBP21953 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHBP21953 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHBP21953 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHBP21953 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHBP21953 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.26■□□□□ 0.83
BCKDHBP21953 AL353708.3-201ENST00000610272 989 ntBASIC20.26■□□□□ 0.83
BCKDHBP21953 AC026471.5-201ENST00000615068 467 ntBASIC20.26■□□□□ 0.83
BCKDHBP21953 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHBP21953 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHBP21953 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHBP21953 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHBP21953 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.26■□□□□ 0.83
BCKDHBP21953 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHBP21953 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
BCKDHBP21953 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.26■□□□□ 0.83
BCKDHBP21953 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BCKDHBP21953 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms