Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.83■□□□□ 0.6
PRKCAP17252 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PRKCAP17252 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.83■□□□□ 0.6
PRKCAP17252 IKBKGP1-201ENST00000612193 1073 ntBASIC18.83■□□□□ 0.6
PRKCAP17252 AC092437.1-201ENST00000624794 1048 ntBASIC18.83■□□□□ 0.6
PRKCAP17252 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRKCAP17252 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRKCAP17252 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRKCAP17252 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PRKCAP17252 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.83■□□□□ 0.6
PRKCAP17252 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRKCAP17252 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
PRKCAP17252 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRKCAP17252 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRKCAP17252 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCAP17252 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.82■□□□□ 0.6
PRKCAP17252 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCAP17252 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PRKCAP17252 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PRKCAP17252 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.82■□□□□ 0.6
PRKCAP17252 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCAP17252 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCAP17252 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCAP17252 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCAP17252 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCAP17252 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCAP17252 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCAP17252 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PRKCAP17252 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCAP17252 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PRKCAP17252 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCAP17252 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
PRKCAP17252 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCAP17252 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRKCAP17252 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCAP17252 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCAP17252 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.81■□□□□ 0.6
PRKCAP17252 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCAP17252 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCAP17252 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCAP17252 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCAP17252 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCAP17252 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PRKCAP17252 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCAP17252 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PRKCAP17252 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.81■□□□□ 0.6
PRKCAP17252 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.81■□□□□ 0.6
PRKCAP17252 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.81■□□□□ 0.6
PRKCAP17252 TERF1P5-201ENST00000477545 1207 ntBASIC18.81■□□□□ 0.6
PRKCAP17252 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.81■□□□□ 0.6
PRKCAP17252 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.81■□□□□ 0.6
PRKCAP17252 AC011767.1-201ENST00000617410 1153 ntBASIC18.81■□□□□ 0.6
PRKCAP17252 BID-214ENST00000617586 542 ntTSL 5 BASIC18.81■□□□□ 0.6
PRKCAP17252 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRKCAP17252 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRKCAP17252 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCAP17252 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PRKCAP17252 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCAP17252 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.8■□□□□ 0.6
PRKCAP17252 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRKCAP17252 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRKCAP17252 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PRKCAP17252 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRKCAP17252 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRKCAP17252 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRKCAP17252 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.8■□□□□ 0.6
PRKCAP17252 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.8■□□□□ 0.6
PRKCAP17252 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.8■□□□□ 0.6
PRKCAP17252 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
PRKCAP17252 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRKCAP17252 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.8■□□□□ 0.6
PRKCAP17252 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRKCAP17252 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRKCAP17252 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRKCAP17252 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKCAP17252 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.79■□□□□ 0.6
PRKCAP17252 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKCAP17252 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKCAP17252 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKCAP17252 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKCAP17252 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKCAP17252 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKCAP17252 AC091799.1-201ENST00000422823 811 ntBASIC18.79■□□□□ 0.6
PRKCAP17252 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.79■□□□□ 0.6
PRKCAP17252 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRKCAP17252 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
PRKCAP17252 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.79■□□□□ 0.6
PRKCAP17252 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
PRKCAP17252 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PRKCAP17252 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.79■□□□□ 0.6
PRKCAP17252 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PRKCAP17252 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRKCAP17252 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRKCAP17252 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKCAP17252 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRKCAP17252 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.79■□□□□ 0.6
PRKCAP17252 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.79■□□□□ 0.6
PRKCAP17252 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKCAP17252 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.79■□□□□ 0.6
PRKCAP17252 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms