Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRAFP15056 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
BRAFP15056 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRAFP15056 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRAFP15056 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BRAFP15056 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.94■□□□□ 0.94
BRAFP15056 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.94■□□□□ 0.94
BRAFP15056 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
BRAFP15056 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
BRAFP15056 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRAFP15056 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.93■□□□□ 0.94
BRAFP15056 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRAFP15056 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRAFP15056 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.93■□□□□ 0.94
BRAFP15056 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.93■□□□□ 0.94
BRAFP15056 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.93■□□□□ 0.94
BRAFP15056 AC092437.1-201ENST00000624794 1048 ntBASIC20.93■□□□□ 0.94
BRAFP15056 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRAFP15056 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRAFP15056 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.93■□□□□ 0.94
BRAFP15056 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRAFP15056 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRAFP15056 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BRAFP15056 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
BRAFP15056 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BRAFP15056 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
BRAFP15056 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRAFP15056 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRAFP15056 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRAFP15056 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BRAFP15056 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRAFP15056 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRAFP15056 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.92■□□□□ 0.94
BRAFP15056 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BRAFP15056 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.92■□□□□ 0.94
BRAFP15056 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.92■□□□□ 0.94
BRAFP15056 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.92■□□□□ 0.94
BRAFP15056 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRAFP15056 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRAFP15056 AL512408.1-201ENST00000569378 2000 ntBASIC20.92■□□□□ 0.94
BRAFP15056 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRAFP15056 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRAFP15056 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
BRAFP15056 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRAFP15056 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
BRAFP15056 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
BRAFP15056 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRAFP15056 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRAFP15056 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.91■□□□□ 0.94
BRAFP15056 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.91■□□□□ 0.94
BRAFP15056 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.91■□□□□ 0.94
BRAFP15056 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
BRAFP15056 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.91■□□□□ 0.94
BRAFP15056 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.91■□□□□ 0.94
BRAFP15056 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRAFP15056 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BRAFP15056 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BRAFP15056 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.91■□□□□ 0.94
BRAFP15056 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.91■□□□□ 0.94
BRAFP15056 AL162377.1-201ENST00000618844 1793 ntBASIC20.91■□□□□ 0.94
BRAFP15056 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRAFP15056 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRAFP15056 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRAFP15056 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
BRAFP15056 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
BRAFP15056 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BRAFP15056 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRAFP15056 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRAFP15056 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
BRAFP15056 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
BRAFP15056 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
BRAFP15056 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BRAFP15056 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.9■□□□□ 0.94
BRAFP15056 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.9■□□□□ 0.94
BRAFP15056 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.9■□□□□ 0.94
BRAFP15056 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRAFP15056 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRAFP15056 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
BRAFP15056 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRAFP15056 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRAFP15056 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRAFP15056 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRAFP15056 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.9■□□□□ 0.94
BRAFP15056 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.89■□□□□ 0.94
BRAFP15056 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRAFP15056 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.89■□□□□ 0.93
BRAFP15056 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.89■□□□□ 0.93
BRAFP15056 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRAFP15056 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
BRAFP15056 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRAFP15056 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRAFP15056 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRAFP15056 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.89■□□□□ 0.93
BRAFP15056 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.89■□□□□ 0.93
BRAFP15056 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRAFP15056 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BRAFP15056 AC087289.5-201ENST00000586076 3175 ntBASIC20.89■□□□□ 0.93
BRAFP15056 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.89■□□□□ 0.93
BRAFP15056 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRAFP15056 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms