Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CHRNB1P11230 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNB1P11230 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.78■□□□□ 0.92
CHRNB1P11230 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNB1P11230 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNB1P11230 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CHRNB1P11230 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.78■□□□□ 0.92
CHRNB1P11230 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.78■□□□□ 0.92
CHRNB1P11230 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.78■□□□□ 0.92
CHRNB1P11230 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.78■□□□□ 0.92
CHRNB1P11230 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNB1P11230 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNB1P11230 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CHRNB1P11230 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.78■□□□□ 0.92
CHRNB1P11230 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNB1P11230 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.78■□□□□ 0.92
CHRNB1P11230 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNB1P11230 RARRES2P10-201ENST00000564312 460 ntBASIC20.78■□□□□ 0.92
CHRNB1P11230 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CHRNB1P11230 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CHRNB1P11230 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CHRNB1P11230 AC012306.2-201ENST00000609350 630 ntBASIC20.78■□□□□ 0.92
CHRNB1P11230 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNB1P11230 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.78■□□□□ 0.92
CHRNB1P11230 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHRNB1P11230 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNB1P11230 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNB1P11230 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNB1P11230 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNB1P11230 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.77■□□□□ 0.92
CHRNB1P11230 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNB1P11230 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHRNB1P11230 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.77■□□□□ 0.92
CHRNB1P11230 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.77■□□□□ 0.92
CHRNB1P11230 AC097493.4-201ENST00000641197 219 ntBASIC20.77■□□□□ 0.92
CHRNB1P11230 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.77■□□□□ 0.92
CHRNB1P11230 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.77■□□□□ 0.92
CHRNB1P11230 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHRNB1P11230 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
CHRNB1P11230 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHRNB1P11230 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHRNB1P11230 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.77■□□□□ 0.91
CHRNB1P11230 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNB1P11230 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNB1P11230 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNB1P11230 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.76■□□□□ 0.91
CHRNB1P11230 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.76■□□□□ 0.91
CHRNB1P11230 PRKY-204ENST00000533551 1019 ntBASIC20.76■□□□□ 0.91
CHRNB1P11230 AL355075.4-201ENST00000554988 638 ntBASIC20.76■□□□□ 0.91
CHRNB1P11230 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.76■□□□□ 0.91
CHRNB1P11230 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.76■□□□□ 0.91
CHRNB1P11230 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNB1P11230 SLC25A24-204ENST00000569674 2357 ntBASIC20.76■□□□□ 0.91
CHRNB1P11230 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNB1P11230 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.76■□□□□ 0.91
CHRNB1P11230 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CHRNB1P11230 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
CHRNB1P11230 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNB1P11230 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHRNB1P11230 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.75■□□□□ 0.91
CHRNB1P11230 C1orf229-201ENST00000623686 2258 ntBASIC20.75■□□□□ 0.91
CHRNB1P11230 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.75■□□□□ 0.91
CHRNB1P11230 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNB1P11230 PGM5P4-201ENST00000421970 445 ntBASIC20.75■□□□□ 0.91
CHRNB1P11230 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.75■□□□□ 0.91
CHRNB1P11230 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
CHRNB1P11230 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNB1P11230 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.75■□□□□ 0.91
CHRNB1P11230 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.75■□□□□ 0.91
CHRNB1P11230 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CHRNB1P11230 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNB1P11230 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNB1P11230 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNB1P11230 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNB1P11230 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CHRNB1P11230 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.75■□□□□ 0.91
CHRNB1P11230 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHRNB1P11230 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CHRNB1P11230 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHRNB1P11230 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHRNB1P11230 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.74■□□□□ 0.91
CHRNB1P11230 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.74■□□□□ 0.91
CHRNB1P11230 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CHRNB1P11230 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CHRNB1P11230 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.74■□□□□ 0.91
CHRNB1P11230 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.74■□□□□ 0.91
CHRNB1P11230 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CHRNB1P11230 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.74■□□□□ 0.91
CHRNB1P11230 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.74■□□□□ 0.91
CHRNB1P11230 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.74■□□□□ 0.91
CHRNB1P11230 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.74■□□□□ 0.91
CHRNB1P11230 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHRNB1P11230 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.74■□□□□ 0.91
CHRNB1P11230 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CHRNB1P11230 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHRNB1P11230 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.74■□□□□ 0.91
CHRNB1P11230 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
CHRNB1P11230 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
CHRNB1P11230 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.73■□□□□ 0.91
CHRNB1P11230 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms