Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 YPL035CYPL035C 348 nt0.57□□□□□ -2.32
TY2B-LR1P0C2J3 RXT2YBR095C 1293 nt0.57□□□□□ -2.32
TY2B-LR1P0C2J3 PRP39YML046W 1890 nt0.57□□□□□ -2.32
TY2B-LR1P0C2J3 PRK1YIL095W 2433 nt0.57□□□□□ -2.32
TY2B-LR1P0C2J3 GLC7YER133W 939 nt0.56□□□□□ -2.32
TY2B-LR1P0C2J3 YMR31YFR049W 372 nt0.56□□□□□ -2.32
TY2B-LR1P0C2J3 BTN2YGR142W 1233 nt0.56□□□□□ -2.32
TY2B-LR1P0C2J3 YHR214W-AYHR214W-A 486 nt0.56□□□□□ -2.32
TY2B-LR1P0C2J3 YAR068WYAR068W 486 nt0.56□□□□□ -2.32
TY2B-LR1P0C2J3 NYV1YLR093C 762 nt0.55□□□□□ -2.32
TY2B-LR1P0C2J3 YLR400WYLR400W 474 nt0.55□□□□□ -2.32
TY2B-LR1P0C2J3 CUR1YPR158W 759 nt0.55□□□□□ -2.32
TY2B-LR1P0C2J3 CRM1YGR218W 3255 nt0.55□□□□□ -2.32
TY2B-LR1P0C2J3 TRM12YML005W 1389 nt0.55□□□□□ -2.32
TY2B-LR1P0C2J3 LRS4YDR439W 1044 nt0.55□□□□□ -2.32
TY2B-LR1P0C2J3 YPR145C-AYPR145C-A 237 nt0.55□□□□□ -2.32
TY2B-LR1P0C2J3 SEC8YPR055W 3198 nt0.55□□□□□ -2.32
TY2B-LR1P0C2J3 SLK19YOR195W 2466 nt0.54□□□□□ -2.32
TY2B-LR1P0C2J3 YER189WYER189W 369 nt0.54□□□□□ -2.32
TY2B-LR1P0C2J3 YDR355CYDR355C 303 nt0.53□□□□□ -2.32
TY2B-LR1P0C2J3 MTC7YEL033W 420 nt0.53□□□□□ -2.32
TY2B-LR1P0C2J3 NOP53YPL146C 1368 nt0.53□□□□□ -2.33
TY2B-LR1P0C2J3 NSE3YDR288W 912 nt0.52□□□□□ -2.33
TY2B-LR1P0C2J3 YER091C-AYER091C-A 222 nt0.52□□□□□ -2.33
TY2B-LR1P0C2J3 ATG38YLR211C 681 nt0.52□□□□□ -2.33
TY2B-LR1P0C2J3 CPR3YML078W 549 nt0.52□□□□□ -2.33
TY2B-LR1P0C2J3 CAF20YOR276W 486 nt0.52□□□□□ -2.33
TY2B-LR1P0C2J3 SNC2YOR327C 348 nt0.52□□□□□ -2.33
TY2B-LR1P0C2J3 YBR063CYBR063C 1215 nt0.52□□□□□ -2.33
TY2B-LR1P0C2J3 CCL1YPR025C 1182 nt0.52□□□□□ -2.33
TY2B-LR1P0C2J3 YPR063CYPR063C 423 nt0.52□□□□□ -2.33
TY2B-LR1P0C2J3 YDR338CYDR338C 2088 nt0.51□□□□□ -2.33
TY2B-LR1P0C2J3 CSE1YGL238W 2883 nt0.5□□□□□ -2.33
TY2B-LR1P0C2J3 RNH202YDR279W 1053 nt0.5□□□□□ -2.33
TY2B-LR1P0C2J3 YIR023C-AYIR023C-A 324 nt0.5□□□□□ -2.33
TY2B-LR1P0C2J3 FMN1YDR236C 657 nt0.5□□□□□ -2.33
TY2B-LR1P0C2J3 RPL40AYIL148W 387 nt0.5□□□□□ -2.33
TY2B-LR1P0C2J3 YIL161WYIL161W 708 nt0.5□□□□□ -2.33
TY2B-LR1P0C2J3 ASM4YDL088C 1587 nt0.49□□□□□ -2.33
TY2B-LR1P0C2J3 POL4YCR014C 1749 nt0.49□□□□□ -2.33
TY2B-LR1P0C2J3 YSW1YBR148W 1830 nt0.49□□□□□ -2.33
TY2B-LR1P0C2J3 COX1Q0045 1605 nt0.49□□□□□ -2.33
TY2B-LR1P0C2J3 YGR273CYGR273C 525 nt0.49□□□□□ -2.33
TY2B-LR1P0C2J3 RIF2YLR453C 1188 nt0.49□□□□□ -2.33
TY2B-LR1P0C2J3 NSE4YDL105W 1209 nt0.48□□□□□ -2.33
TY2B-LR1P0C2J3 SPO74YGL170C 1242 nt0.48□□□□□ -2.33
TY2B-LR1P0C2J3 YGL177WYGL177W 348 nt0.48□□□□□ -2.33
TY2B-LR1P0C2J3 YBL029WYBL029W 1131 nt0.48□□□□□ -2.33
TY2B-LR1P0C2J3 CSI2YOL007C 1026 nt0.48□□□□□ -2.33
TY2B-LR1P0C2J3 SPP381YBR152W 876 nt0.48□□□□□ -2.33
TY2B-LR1P0C2J3 RGI1YER067W 486 nt0.47□□□□□ -2.33
TY2B-LR1P0C2J3 SPC1YJR010C-A 285 nt0.47□□□□□ -2.33
TY2B-LR1P0C2J3 YMR181CYMR181C 465 nt0.47□□□□□ -2.33
TY2B-LR1P0C2J3 YML002WYML002W 2214 nt0.47□□□□□ -2.33
TY2B-LR1P0C2J3 YGR190CYGR190C 366 nt0.47□□□□□ -2.33
TY2B-LR1P0C2J3 YKL177WYKL177W 339 nt0.47□□□□□ -2.33
TY2B-LR1P0C2J3 GIM3YNL153C 390 nt0.47□□□□□ -2.33
TY2B-LR1P0C2J3 YNL179CYNL179C 438 nt0.47□□□□□ -2.33
TY2B-LR1P0C2J3 YIR036W-AYIR036W-A 402 nt0.46□□□□□ -2.34
TY2B-LR1P0C2J3 UFE1YOR075W 1041 nt0.46□□□□□ -2.34
TY2B-LR1P0C2J3 YPR159C-AYPR159C-A 102 nt0.46□□□□□ -2.34
TY2B-LR1P0C2J3 MYO1YHR023W 5787 nt0.46□□□□□ -2.34
TY2B-LR1P0C2J3 PES4YFR023W 1836 nt0.46□□□□□ -2.34
TY2B-LR1P0C2J3 MUK1YPL070W 1839 nt0.46□□□□□ -2.34
TY2B-LR1P0C2J3 CLB5YPR120C 1308 nt0.46□□□□□ -2.34
TY2B-LR1P0C2J3 ACA1YER045C 1470 nt0.45□□□□□ -2.34
TY2B-LR1P0C2J3 VPS55YJR044C 423 nt0.45□□□□□ -2.34
TY2B-LR1P0C2J3 ATG10YLL042C 504 nt0.45□□□□□ -2.34
TY2B-LR1P0C2J3 AZF1YOR113W 2745 nt0.45□□□□□ -2.34
TY2B-LR1P0C2J3 YIP1YGR172C 747 nt0.45□□□□□ -2.34
TY2B-LR1P0C2J3 CLG1YGL215W 1359 nt0.44□□□□□ -2.34
TY2B-LR1P0C2J3 NCA2YPR155C 1851 nt0.44□□□□□ -2.34
TY2B-LR1P0C2J3 YEA4YEL004W 1029 nt0.44□□□□□ -2.34
TY2B-LR1P0C2J3 SVP26YHR181W 687 nt0.44□□□□□ -2.34
TY2B-LR1P0C2J3 HIR3YJR140C 4947 nt0.44□□□□□ -2.34
TY2B-LR1P0C2J3 YJL022WYJL022W 309 nt0.43□□□□□ -2.34
TY2B-LR1P0C2J3 MRP49YKL167C 414 nt0.43□□□□□ -2.34
TY2B-LR1P0C2J3 ARK1YNL020C 1917 nt0.42□□□□□ -2.34
TY2B-LR1P0C2J3 WHI3YNL197C 1986 nt0.42□□□□□ -2.34
TY2B-LR1P0C2J3 YCR108CYCR108C 192 nt0.42□□□□□ -2.34
TY2B-LR1P0C2J3 YDR320W-BYDR320W-B 138 nt0.42□□□□□ -2.34
TY2B-LR1P0C2J3 CTL1YMR180C 963 nt0.42□□□□□ -2.34
TY2B-LR1P0C2J3 PET123YOR158W 957 nt0.42□□□□□ -2.34
TY2B-LR1P0C2J3 WAR1YML076C 2835 nt0.41□□□□□ -2.34
TY2B-LR1P0C2J3 MUM3YOR298W 1440 nt0.41□□□□□ -2.34
TY2B-LR1P0C2J3 APC5YOR249C 2058 nt0.41□□□□□ -2.34
TY2B-LR1P0C2J3 DIG2YDR480W 972 nt0.41□□□□□ -2.34
TY2B-LR1P0C2J3 YNL144W-AYNL144W-A 84 nt0.41□□□□□ -2.34
TY2B-LR1P0C2J3 LYS14YDR034C 2373 nt0.41□□□□□ -2.34
TY2B-LR1P0C2J3 ALK1YGL021W 2283 nt0.4□□□□□ -2.34
TY2B-LR1P0C2J3 EPT1YHR123W 1176 nt0.4□□□□□ -2.35
TY2B-LR1P0C2J3 YNL010WYNL010W 726 nt0.4□□□□□ -2.35
TY2B-LR1P0C2J3 YOR161W-BYOR161W-B 261 nt0.4□□□□□ -2.35
TY2B-LR1P0C2J3 DGR2YKL121W 2559 nt0.39□□□□□ -2.35
TY2B-LR1P0C2J3 PRS3YHL011C 963 nt0.39□□□□□ -2.35
TY2B-LR1P0C2J3 PRM6YML047C 1059 nt0.39□□□□□ -2.35
TY2B-LR1P0C2J3 NGL1YOL042W 1092 nt0.39□□□□□ -2.35
TY2B-LR1P0C2J3 snR45snR45 172 nt0.39□□□□□ -2.35
TY2B-LR1P0C2J3 SNA4YDL123W 423 nt0.38□□□□□ -2.35
TY2B-LR1P0C2J3 EDC1YGL222C 528 nt0.38□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms