Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.22■■□□□ 1.31
HOXC6P09630 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
HOXC6P09630 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HOXC6P09630 TSPY15P-201ENST00000457163 923 ntBASIC23.22■■□□□ 1.31
HOXC6P09630 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
HOXC6P09630 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.22■■□□□ 1.31
HOXC6P09630 AL356652.1-201ENST00000615962 565 ntBASIC23.22■■□□□ 1.31
HOXC6P09630 AC097493.4-201ENST00000641197 219 ntBASIC23.22■■□□□ 1.31
HOXC6P09630 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HOXC6P09630 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HOXC6P09630 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HOXC6P09630 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HOXC6P09630 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.22■■□□□ 1.31
HOXC6P09630 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.22■■□□□ 1.31
HOXC6P09630 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HOXC6P09630 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HOXC6P09630 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.21■■□□□ 1.31
HOXC6P09630 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.21■■□□□ 1.31
HOXC6P09630 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
HOXC6P09630 AC087499.1-201ENST00000418141 1075 ntBASIC23.21■■□□□ 1.31
HOXC6P09630 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC23.21■■□□□ 1.31
HOXC6P09630 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HOXC6P09630 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
HOXC6P09630 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HOXC6P09630 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HOXC6P09630 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.21■■□□□ 1.31
HOXC6P09630 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
HOXC6P09630 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
HOXC6P09630 ECEL1P1-201ENST00000373592 1742 ntBASIC23.21■■□□□ 1.31
HOXC6P09630 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.21■■□□□ 1.31
HOXC6P09630 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HOXC6P09630 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HOXC6P09630 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HOXC6P09630 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.2■■□□□ 1.3
HOXC6P09630 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
HOXC6P09630 AL390719.1-204ENST00000412397 1219 ntBASIC23.2■■□□□ 1.3
HOXC6P09630 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HOXC6P09630 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.2■■□□□ 1.3
HOXC6P09630 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HOXC6P09630 KRT18P21-201ENST00000515767 1272 ntBASIC23.2■■□□□ 1.3
HOXC6P09630 PRKY-204ENST00000533551 1019 ntBASIC23.2■■□□□ 1.3
HOXC6P09630 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.2■■□□□ 1.3
HOXC6P09630 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.2■■□□□ 1.3
HOXC6P09630 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
HOXC6P09630 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HOXC6P09630 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
HOXC6P09630 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HOXC6P09630 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HOXC6P09630 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HOXC6P09630 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HOXC6P09630 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HOXC6P09630 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
HOXC6P09630 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
HOXC6P09630 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
HOXC6P09630 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HOXC6P09630 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.19■■□□□ 1.3
HOXC6P09630 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.19■■□□□ 1.3
HOXC6P09630 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC23.19■■□□□ 1.3
HOXC6P09630 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.19■■□□□ 1.3
HOXC6P09630 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.19■■□□□ 1.3
HOXC6P09630 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HOXC6P09630 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
HOXC6P09630 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
HOXC6P09630 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HOXC6P09630 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.18■■□□□ 1.3
HOXC6P09630 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HOXC6P09630 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HOXC6P09630 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
HOXC6P09630 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.18■■□□□ 1.3
HOXC6P09630 AC133561.5-201ENST00000635547 218 ntBASIC23.18■■□□□ 1.3
HOXC6P09630 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
HOXC6P09630 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.18■■□□□ 1.3
HOXC6P09630 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HOXC6P09630 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HOXC6P09630 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HOXC6P09630 AL117328.2-201ENST00000624617 1940 ntBASIC23.18■■□□□ 1.3
HOXC6P09630 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HOXC6P09630 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HOXC6P09630 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HOXC6P09630 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.17■■□□□ 1.3
HOXC6P09630 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HOXC6P09630 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HOXC6P09630 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.17■■□□□ 1.3
HOXC6P09630 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.17■■□□□ 1.3
HOXC6P09630 AL355075.4-201ENST00000554988 638 ntBASIC23.17■■□□□ 1.3
HOXC6P09630 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HOXC6P09630 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HOXC6P09630 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HOXC6P09630 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
HOXC6P09630 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HOXC6P09630 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
HOXC6P09630 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
HOXC6P09630 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HOXC6P09630 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HOXC6P09630 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HOXC6P09630 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HOXC6P09630 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HOXC6P09630 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HOXC6P09630 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.16■■□□□ 1.3
HOXC6P09630 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms