Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRPRAP08240 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.68■□□□□ 0.9
SRPRAP08240 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SRPRAP08240 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRPRAP08240 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.68■□□□□ 0.9
SRPRAP08240 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.68■□□□□ 0.9
SRPRAP08240 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.68■□□□□ 0.9
SRPRAP08240 MIR2861-201ENST00000636310 90 ntBASIC20.68■□□□□ 0.9
SRPRAP08240 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRPRAP08240 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.68■□□□□ 0.9
SRPRAP08240 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.68■□□□□ 0.9
SRPRAP08240 FEM1AP4-201ENST00000443167 1987 ntBASIC20.68■□□□□ 0.9
SRPRAP08240 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRPRAP08240 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRPRAP08240 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRPRAP08240 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SRPRAP08240 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.67■□□□□ 0.9
SRPRAP08240 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRPRAP08240 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRPRAP08240 AC128676.1-201ENST00000454392 318 ntBASIC20.67■□□□□ 0.9
SRPRAP08240 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
SRPRAP08240 AC008687.6-201ENST00000596318 630 ntBASIC20.67■□□□□ 0.9
SRPRAP08240 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRPRAP08240 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRPRAP08240 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRPRAP08240 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRPRAP08240 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRPRAP08240 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SRPRAP08240 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SRPRAP08240 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRPRAP08240 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRPRAP08240 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRPRAP08240 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRPRAP08240 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SRPRAP08240 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRPRAP08240 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRPRAP08240 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRPRAP08240 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SRPRAP08240 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRPRAP08240 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRPRAP08240 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRPRAP08240 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SRPRAP08240 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.66■□□□□ 0.9
SRPRAP08240 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.66■□□□□ 0.9
SRPRAP08240 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.66■□□□□ 0.9
SRPRAP08240 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.66■□□□□ 0.9
SRPRAP08240 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRPRAP08240 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.66■□□□□ 0.9
SRPRAP08240 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SRPRAP08240 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SRPRAP08240 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.66■□□□□ 0.9
SRPRAP08240 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRPRAP08240 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SRPRAP08240 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRPRAP08240 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRPRAP08240 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.65■□□□□ 0.9
SRPRAP08240 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRPRAP08240 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SRPRAP08240 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRPRAP08240 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRPRAP08240 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRPRAP08240 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRPRAP08240 KRT8P36-201ENST00000489121 1440 ntBASIC20.65■□□□□ 0.9
SRPRAP08240 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SRPRAP08240 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRPRAP08240 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SRPRAP08240 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.65■□□□□ 0.9
SRPRAP08240 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRPRAP08240 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRPRAP08240 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRPRAP08240 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
SRPRAP08240 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
SRPRAP08240 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SRPRAP08240 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRPRAP08240 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SRPRAP08240 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRPRAP08240 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SRPRAP08240 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRPRAP08240 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SRPRAP08240 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRPRAP08240 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.64■□□□□ 0.89
SRPRAP08240 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.64■□□□□ 0.89
SRPRAP08240 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRPRAP08240 SOX15-203ENST00000570788 1093 ntBASIC20.64■□□□□ 0.89
SRPRAP08240 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.64■□□□□ 0.89
SRPRAP08240 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.64■□□□□ 0.89
SRPRAP08240 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRPRAP08240 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SRPRAP08240 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
SRPRAP08240 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SRPRAP08240 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.63■□□□□ 0.89
SRPRAP08240 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRPRAP08240 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SRPRAP08240 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRPRAP08240 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRPRAP08240 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.63■□□□□ 0.89
SRPRAP08240 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.63■□□□□ 0.89
SRPRAP08240 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRPRAP08240 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.63■□□□□ 0.89
SRPRAP08240 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms