Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 AC007952.6-201ENST00000573168 2673 ntBASIC18.31■□□□□ 0.52
GYPBP06028 AC003957.1-201ENST00000625108 2673 ntBASIC18.31■□□□□ 0.52
GYPBP06028 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
GYPBP06028 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
GYPBP06028 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GYPBP06028 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GYPBP06028 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GYPBP06028 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GYPBP06028 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.3■□□□□ 0.52
GYPBP06028 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.3■□□□□ 0.52
GYPBP06028 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
GYPBP06028 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.3■□□□□ 0.52
GYPBP06028 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.3■□□□□ 0.52
GYPBP06028 IRS3P-201ENST00000223076 1006 ntBASIC18.3■□□□□ 0.52
GYPBP06028 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GYPBP06028 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GYPBP06028 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.3■□□□□ 0.52
GYPBP06028 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.3■□□□□ 0.52
GYPBP06028 AC245052.3-201ENST00000450182 901 ntBASIC18.3■□□□□ 0.52
GYPBP06028 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GYPBP06028 AC105265.2-201ENST00000467189 838 ntBASIC18.3■□□□□ 0.52
GYPBP06028 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GYPBP06028 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.3■□□□□ 0.52
GYPBP06028 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GYPBP06028 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GYPBP06028 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.3■□□□□ 0.52
GYPBP06028 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.3■□□□□ 0.52
GYPBP06028 KRT16P2-201ENST00000414673 1423 ntBASIC18.3■□□□□ 0.52
GYPBP06028 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GYPBP06028 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.3■□□□□ 0.52
GYPBP06028 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GYPBP06028 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.3■□□□□ 0.52
GYPBP06028 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GYPBP06028 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GYPBP06028 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GYPBP06028 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.29■□□□□ 0.52
GYPBP06028 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GYPBP06028 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GYPBP06028 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GYPBP06028 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.29■□□□□ 0.52
GYPBP06028 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GYPBP06028 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.29■□□□□ 0.52
GYPBP06028 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
GYPBP06028 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GYPBP06028 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.28■□□□□ 0.52
GYPBP06028 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GYPBP06028 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
GYPBP06028 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
GYPBP06028 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GYPBP06028 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
GYPBP06028 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GYPBP06028 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.28■□□□□ 0.52
GYPBP06028 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.28■□□□□ 0.52
GYPBP06028 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GYPBP06028 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GYPBP06028 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.28■□□□□ 0.52
GYPBP06028 AC120498.10-201ENST00000621827 505 ntBASIC18.28■□□□□ 0.52
GYPBP06028 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GYPBP06028 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GYPBP06028 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GYPBP06028 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GYPBP06028 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GYPBP06028 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
GYPBP06028 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
GYPBP06028 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GYPBP06028 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GYPBP06028 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GYPBP06028 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GYPBP06028 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GYPBP06028 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GYPBP06028 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
GYPBP06028 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GYPBP06028 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.27■□□□□ 0.52
GYPBP06028 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GYPBP06028 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.27■□□□□ 0.52
GYPBP06028 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GYPBP06028 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GYPBP06028 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GYPBP06028 AC010141.2-201ENST00000452426 721 ntBASIC18.27■□□□□ 0.52
GYPBP06028 SLC7A5P2-201ENST00000553010 536 ntBASIC18.27■□□□□ 0.52
GYPBP06028 AC104187.1-201ENST00000607510 612 ntBASIC18.27■□□□□ 0.52
GYPBP06028 AC005837.3-201ENST00000612163 286 ntBASIC18.27■□□□□ 0.52
GYPBP06028 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
GYPBP06028 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GYPBP06028 SMG8-203ENST00000578922 2178 ntBASIC18.27■□□□□ 0.51
GYPBP06028 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
GYPBP06028 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GYPBP06028 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
GYPBP06028 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GYPBP06028 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
GYPBP06028 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.26■□□□□ 0.51
GYPBP06028 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.26■□□□□ 0.51
GYPBP06028 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
GYPBP06028 AC027612.3-201ENST00000413684 1047 ntBASIC18.26■□□□□ 0.51
GYPBP06028 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.26■□□□□ 0.51
GYPBP06028 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.26■□□□□ 0.51
GYPBP06028 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GYPBP06028 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GYPBP06028 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GYPBP06028 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms