Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
OPN1SWP03999 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPN1SWP03999 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
OPN1SWP03999 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
OPN1SWP03999 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPN1SWP03999 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.05■□□□□ 0.64
OPN1SWP03999 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
OPN1SWP03999 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.04■□□□□ 0.64
OPN1SWP03999 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
OPN1SWP03999 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.04■□□□□ 0.64
OPN1SWP03999 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
OPN1SWP03999 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OPN1SWP03999 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
OPN1SWP03999 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.04■□□□□ 0.64
OPN1SWP03999 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OPN1SWP03999 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OPN1SWP03999 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
OPN1SWP03999 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OPN1SWP03999 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
OPN1SWP03999 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OPN1SWP03999 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.04■□□□□ 0.64
OPN1SWP03999 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
OPN1SWP03999 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
OPN1SWP03999 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
OPN1SWP03999 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
OPN1SWP03999 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
OPN1SWP03999 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
OPN1SWP03999 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
OPN1SWP03999 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.03■□□□□ 0.64
OPN1SWP03999 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
OPN1SWP03999 KRT16P2-201ENST00000414673 1423 ntBASIC19.03■□□□□ 0.64
OPN1SWP03999 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
OPN1SWP03999 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
OPN1SWP03999 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
OPN1SWP03999 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.03■□□□□ 0.64
OPN1SWP03999 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.03■□□□□ 0.64
OPN1SWP03999 AC105265.2-201ENST00000467189 838 ntBASIC19.03■□□□□ 0.64
OPN1SWP03999 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.03■□□□□ 0.64
OPN1SWP03999 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.03■□□□□ 0.64
OPN1SWP03999 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.03■□□□□ 0.64
OPN1SWP03999 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
OPN1SWP03999 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.03■□□□□ 0.64
OPN1SWP03999 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
OPN1SWP03999 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.03■□□□□ 0.64
OPN1SWP03999 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
OPN1SWP03999 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
OPN1SWP03999 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
OPN1SWP03999 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
OPN1SWP03999 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.02■□□□□ 0.64
OPN1SWP03999 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
OPN1SWP03999 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
OPN1SWP03999 AC010141.2-201ENST00000452426 721 ntBASIC19.02■□□□□ 0.64
OPN1SWP03999 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
OPN1SWP03999 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
OPN1SWP03999 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.02■□□□□ 0.64
OPN1SWP03999 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
OPN1SWP03999 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
OPN1SWP03999 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
OPN1SWP03999 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.02■□□□□ 0.64
OPN1SWP03999 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
OPN1SWP03999 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
OPN1SWP03999 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
OPN1SWP03999 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1SWP03999 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
OPN1SWP03999 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.01■□□□□ 0.63
OPN1SWP03999 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1SWP03999 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1SWP03999 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1SWP03999 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
OPN1SWP03999 SMG8-203ENST00000578922 2178 ntBASIC19.01■□□□□ 0.63
OPN1SWP03999 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1SWP03999 IRS3P-201ENST00000223076 1006 ntBASIC19.01■□□□□ 0.63
OPN1SWP03999 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1SWP03999 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1SWP03999 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1SWP03999 SLC7A5P2-201ENST00000553010 536 ntBASIC19.01■□□□□ 0.63
OPN1SWP03999 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1SWP03999 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1SWP03999 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1SWP03999 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
OPN1SWP03999 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1SWP03999 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.01■□□□□ 0.63
OPN1SWP03999 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1SWP03999 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
OPN1SWP03999 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1SWP03999 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19■□□□□ 0.63
OPN1SWP03999 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
OPN1SWP03999 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
OPN1SWP03999 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19■□□□□ 0.63
OPN1SWP03999 AC104187.1-201ENST00000607510 612 ntBASIC19■□□□□ 0.63
OPN1SWP03999 AC120498.10-201ENST00000621827 505 ntBASIC19■□□□□ 0.63
OPN1SWP03999 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
OPN1SWP03999 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19■□□□□ 0.63
OPN1SWP03999 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
OPN1SWP03999 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
OPN1SWP03999 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19■□□□□ 0.63
OPN1SWP03999 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
OPN1SWP03999 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19■□□□□ 0.63
OPN1SWP03999 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19■□□□□ 0.63
OPN1SWP03999 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms