Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PGK1P00558 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PGK1P00558 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.87■■□□□ 1.25
PGK1P00558 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PGK1P00558 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PGK1P00558 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.86■■□□□ 1.25
PGK1P00558 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PGK1P00558 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PGK1P00558 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PGK1P00558 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PGK1P00558 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PGK1P00558 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PGK1P00558 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PGK1P00558 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.86■■□□□ 1.25
PGK1P00558 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.86■■□□□ 1.25
PGK1P00558 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.86■■□□□ 1.25
PGK1P00558 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.86■■□□□ 1.25
PGK1P00558 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.86■■□□□ 1.25
PGK1P00558 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.86■■□□□ 1.25
PGK1P00558 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.86■■□□□ 1.25
PGK1P00558 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PGK1P00558 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PGK1P00558 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.85■■□□□ 1.25
PGK1P00558 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PGK1P00558 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PGK1P00558 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.85■■□□□ 1.25
PGK1P00558 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PGK1P00558 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
PGK1P00558 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PGK1P00558 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PGK1P00558 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PGK1P00558 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PGK1P00558 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PGK1P00558 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PGK1P00558 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
PGK1P00558 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC22.85■■□□□ 1.25
PGK1P00558 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.85■■□□□ 1.25
PGK1P00558 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
PGK1P00558 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
PGK1P00558 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PGK1P00558 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.85■■□□□ 1.25
PGK1P00558 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
PGK1P00558 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PGK1P00558 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.84■■□□□ 1.25
PGK1P00558 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PGK1P00558 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
PGK1P00558 RCN1P1-201ENST00000400413 996 ntBASIC22.84■■□□□ 1.25
PGK1P00558 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.84■■□□□ 1.25
PGK1P00558 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PGK1P00558 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.84■■□□□ 1.25
PGK1P00558 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.84■■□□□ 1.25
PGK1P00558 AC012306.2-201ENST00000609350 630 ntBASIC22.84■■□□□ 1.25
PGK1P00558 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PGK1P00558 AC097493.4-201ENST00000641197 219 ntBASIC22.84■■□□□ 1.25
PGK1P00558 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PGK1P00558 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.84■■□□□ 1.25
PGK1P00558 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.84■■□□□ 1.25
PGK1P00558 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.84■■□□□ 1.25
PGK1P00558 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PGK1P00558 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PGK1P00558 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
PGK1P00558 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.83■■□□□ 1.25
PGK1P00558 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PGK1P00558 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.83■■□□□ 1.25
PGK1P00558 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.83■■□□□ 1.25
PGK1P00558 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PGK1P00558 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PGK1P00558 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PGK1P00558 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PGK1P00558 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PGK1P00558 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PGK1P00558 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.83■■□□□ 1.25
PGK1P00558 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PGK1P00558 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PGK1P00558 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.83■■□□□ 1.25
PGK1P00558 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
PGK1P00558 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC22.83■■□□□ 1.25
PGK1P00558 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
PGK1P00558 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
PGK1P00558 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PGK1P00558 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.82■■□□□ 1.24
PGK1P00558 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PGK1P00558 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
PGK1P00558 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.82■■□□□ 1.24
PGK1P00558 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
PGK1P00558 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.82■■□□□ 1.24
PGK1P00558 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.82■■□□□ 1.24
PGK1P00558 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PGK1P00558 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PGK1P00558 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
PGK1P00558 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PGK1P00558 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PGK1P00558 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PGK1P00558 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PGK1P00558 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.81■■□□□ 1.24
PGK1P00558 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.81■■□□□ 1.24
PGK1P00558 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.81■■□□□ 1.24
PGK1P00558 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.81■■□□□ 1.24
PGK1P00558 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
PGK1P00558 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms