Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MT-CO1P00395 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MT-CO1P00395 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MT-CO1P00395 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.91■□□□□ 0.94
MT-CO1P00395 AC011484.1-201ENST00000377652 1995 ntBASIC20.91■□□□□ 0.94
MT-CO1P00395 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MT-CO1P00395 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MT-CO1P00395 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
MT-CO1P00395 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.91■□□□□ 0.94
MT-CO1P00395 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.91■□□□□ 0.94
MT-CO1P00395 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.91■□□□□ 0.94
MT-CO1P00395 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MT-CO1P00395 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.91■□□□□ 0.94
MT-CO1P00395 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MT-CO1P00395 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MT-CO1P00395 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MT-CO1P00395 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MT-CO1P00395 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MT-CO1P00395 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
MT-CO1P00395 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MT-CO1P00395 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MT-CO1P00395 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MT-CO1P00395 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.9■□□□□ 0.94
MT-CO1P00395 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MT-CO1P00395 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.9■□□□□ 0.94
MT-CO1P00395 LSM12P1-201ENST00000411836 588 ntBASIC20.9■□□□□ 0.94
MT-CO1P00395 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.9■□□□□ 0.94
MT-CO1P00395 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
MT-CO1P00395 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MT-CO1P00395 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.9■□□□□ 0.94
MT-CO1P00395 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.9■□□□□ 0.94
MT-CO1P00395 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
MT-CO1P00395 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.9■□□□□ 0.94
MT-CO1P00395 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MT-CO1P00395 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MT-CO1P00395 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.89■□□□□ 0.94
MT-CO1P00395 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MT-CO1P00395 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
MT-CO1P00395 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.89■□□□□ 0.93
MT-CO1P00395 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.89■□□□□ 0.93
MT-CO1P00395 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MT-CO1P00395 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MT-CO1P00395 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MT-CO1P00395 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MT-CO1P00395 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
MT-CO1P00395 KRT18P68-201ENST00000392293 1000 ntBASIC20.89■□□□□ 0.93
MT-CO1P00395 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MT-CO1P00395 DUSP5P2-201ENST00000426873 1033 ntBASIC20.89■□□□□ 0.93
MT-CO1P00395 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.89■□□□□ 0.93
MT-CO1P00395 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.89■□□□□ 0.93
MT-CO1P00395 KRT18P6-201ENST00000555540 1265 ntBASIC20.89■□□□□ 0.93
MT-CO1P00395 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MT-CO1P00395 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.89■□□□□ 0.93
MT-CO1P00395 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MT-CO1P00395 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MT-CO1P00395 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MT-CO1P00395 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
MT-CO1P00395 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.88■□□□□ 0.93
MT-CO1P00395 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MT-CO1P00395 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MT-CO1P00395 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MT-CO1P00395 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MT-CO1P00395 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MT-CO1P00395 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
MT-CO1P00395 AC091874.3-201ENST00000512672 1195 ntBASIC20.88■□□□□ 0.93
MT-CO1P00395 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
MT-CO1P00395 AC083880.1-201ENST00000608266 535 ntBASIC20.88■□□□□ 0.93
MT-CO1P00395 MYC-209ENST00000641252 345 ntBASIC20.88■□□□□ 0.93
MT-CO1P00395 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
MT-CO1P00395 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
MT-CO1P00395 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MT-CO1P00395 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.88■□□□□ 0.93
MT-CO1P00395 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.87■□□□□ 0.93
MT-CO1P00395 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MT-CO1P00395 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
MT-CO1P00395 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MT-CO1P00395 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MT-CO1P00395 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.87■□□□□ 0.93
MT-CO1P00395 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
MT-CO1P00395 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.87■□□□□ 0.93
MT-CO1P00395 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.87■□□□□ 0.93
MT-CO1P00395 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.87■□□□□ 0.93
MT-CO1P00395 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
MT-CO1P00395 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.87■□□□□ 0.93
MT-CO1P00395 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MT-CO1P00395 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
MT-CO1P00395 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.87■□□□□ 0.93
MT-CO1P00395 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MT-CO1P00395 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MT-CO1P00395 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.87■□□□□ 0.93
MT-CO1P00395 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MT-CO1P00395 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.87■□□□□ 0.93
MT-CO1P00395 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MT-CO1P00395 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MT-CO1P00395 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.86■□□□□ 0.93
MT-CO1P00395 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MT-CO1P00395 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.86■□□□□ 0.93
MT-CO1P00395 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
MT-CO1P00395 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.86■□□□□ 0.93
MT-CO1P00395 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms