Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.88■□□□□ 0.61
NKX2-2O95096 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NKX2-2O95096 AC069236.1-201ENST00000604339 616 ntBASIC18.88■□□□□ 0.61
NKX2-2O95096 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-2O95096 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.88■□□□□ 0.61
NKX2-2O95096 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-2O95096 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-2O95096 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-2O95096 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.88■□□□□ 0.61
NKX2-2O95096 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NKX2-2O95096 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.88■□□□□ 0.61
NKX2-2O95096 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.87■□□□□ 0.61
NKX2-2O95096 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-2O95096 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-2O95096 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.87■□□□□ 0.61
NKX2-2O95096 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-2O95096 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-2O95096 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NKX2-2O95096 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-2O95096 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.87■□□□□ 0.61
NKX2-2O95096 CDCA4P2-201ENST00000441182 718 ntBASIC18.87■□□□□ 0.61
NKX2-2O95096 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
NKX2-2O95096 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-2O95096 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-2O95096 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-2O95096 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.87■□□□□ 0.61
NKX2-2O95096 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-2O95096 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.87■□□□□ 0.61
NKX2-2O95096 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.87■□□□□ 0.61
NKX2-2O95096 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.87■□□□□ 0.61
NKX2-2O95096 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NKX2-2O95096 AC005181.1-201ENST00000604782 1256 ntBASIC18.87■□□□□ 0.61
NKX2-2O95096 AL356652.1-201ENST00000615962 565 ntBASIC18.87■□□□□ 0.61
NKX2-2O95096 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
NKX2-2O95096 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.86■□□□□ 0.61
NKX2-2O95096 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-2O95096 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.86■□□□□ 0.61
NKX2-2O95096 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NKX2-2O95096 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.86■□□□□ 0.61
NKX2-2O95096 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-2O95096 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.86■□□□□ 0.61
NKX2-2O95096 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-2O95096 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.86■□□□□ 0.61
NKX2-2O95096 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.86■□□□□ 0.61
NKX2-2O95096 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-2O95096 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NKX2-2O95096 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.86■□□□□ 0.61
NKX2-2O95096 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-2O95096 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-2O95096 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-2O95096 MCRIP2P1-201ENST00000394346 511 ntBASIC18.86■□□□□ 0.61
NKX2-2O95096 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.86■□□□□ 0.61
NKX2-2O95096 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.86■□□□□ 0.61
NKX2-2O95096 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.86■□□□□ 0.61
NKX2-2O95096 OR10C1-204ENST00000622521 1039 ntBASIC18.86■□□□□ 0.61
NKX2-2O95096 AC008694.1-202ENST00000636953 945 ntBASIC18.86■□□□□ 0.61
NKX2-2O95096 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-2O95096 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-2O95096 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.86■□□□□ 0.61
NKX2-2O95096 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NKX2-2O95096 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.86■□□□□ 0.61
NKX2-2O95096 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.86■□□□□ 0.61
NKX2-2O95096 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-2O95096 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.86■□□□□ 0.61
NKX2-2O95096 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NKX2-2O95096 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.85■□□□□ 0.61
NKX2-2O95096 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.85■□□□□ 0.61
NKX2-2O95096 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-2O95096 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-2O95096 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-2O95096 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.85■□□□□ 0.61
NKX2-2O95096 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-2O95096 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-2O95096 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-2O95096 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NKX2-2O95096 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-2O95096 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-2O95096 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-2O95096 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-2O95096 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-2O95096 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NKX2-2O95096 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NKX2-2O95096 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-2O95096 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-2O95096 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-2O95096 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-2O95096 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-2O95096 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-2O95096 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-2O95096 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-2O95096 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-2O95096 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.84■□□□□ 0.61
NKX2-2O95096 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-2O95096 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-2O95096 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
NKX2-2O95096 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-2O95096 RAP2CP1-201ENST00000605103 478 ntBASIC18.84■□□□□ 0.61
NKX2-2O95096 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.84■□□□□ 0.61
NKX2-2O95096 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.84■□□□□ 0.61
NKX2-2O95096 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms