Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SNCGO76070 TNXA-203ENST00000507684 2038 ntBASIC13.76□□□□□ -0.21
SNCGO76070 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SNCGO76070 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 OXCT2P1-201ENST00000447263 1535 ntBASIC13.76□□□□□ -0.21
SNCGO76070 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.76□□□□□ -0.21
SNCGO76070 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
SNCGO76070 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SNCGO76070 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.76□□□□□ -0.21
SNCGO76070 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SNCGO76070 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SNCGO76070 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC13.76□□□□□ -0.21
SNCGO76070 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC13.76□□□□□ -0.21
SNCGO76070 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
SNCGO76070 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC13.75□□□□□ -0.21
SNCGO76070 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.75□□□□□ -0.21
SNCGO76070 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
SNCGO76070 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
SNCGO76070 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 AC060814.1-201ENST00000554326 538 ntBASIC13.75□□□□□ -0.21
SNCGO76070 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SNCGO76070 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SNCGO76070 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC13.75□□□□□ -0.21
SNCGO76070 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNCGO76070 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
SNCGO76070 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC13.75□□□□□ -0.21
SNCGO76070 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCGO76070 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SNCGO76070 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SNCGO76070 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCGO76070 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNCGO76070 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCGO76070 LINC01960-201ENST00000563759 1884 ntBASIC13.74□□□□□ -0.21
SNCGO76070 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCGO76070 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
SNCGO76070 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SNCGO76070 NEFHP1-201ENST00000412845 2629 ntBASIC13.74□□□□□ -0.21
SNCGO76070 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNCGO76070 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCGO76070 AC104564.3-201ENST00000582367 638 ntBASIC13.74□□□□□ -0.21
SNCGO76070 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNCGO76070 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCGO76070 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNCGO76070 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC13.74□□□□□ -0.21
SNCGO76070 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCGO76070 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCGO76070 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCGO76070 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNCGO76070 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC13.74□□□□□ -0.21
SNCGO76070 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNCGO76070 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
SNCGO76070 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCGO76070 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.73□□□□□ -0.21
SNCGO76070 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCGO76070 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCGO76070 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNCGO76070 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC13.73□□□□□ -0.21
SNCGO76070 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCGO76070 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCGO76070 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SNCGO76070 AC011551.1-201ENST00000614101 683 ntBASIC13.73□□□□□ -0.21
SNCGO76070 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCGO76070 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCGO76070 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms