Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.17■□□□□ 0.82
SUPT3HO75486 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SUPT3HO75486 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SUPT3HO75486 ZNRF2P3-201ENST00000424200 374 ntBASIC20.17■□□□□ 0.82
SUPT3HO75486 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.17■□□□□ 0.82
SUPT3HO75486 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.17■□□□□ 0.82
SUPT3HO75486 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SUPT3HO75486 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SUPT3HO75486 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SUPT3HO75486 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SUPT3HO75486 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SUPT3HO75486 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.17■□□□□ 0.82
SUPT3HO75486 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SUPT3HO75486 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.17■□□□□ 0.82
SUPT3HO75486 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.16■□□□□ 0.82
SUPT3HO75486 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SUPT3HO75486 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.16■□□□□ 0.82
SUPT3HO75486 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SUPT3HO75486 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SUPT3HO75486 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SUPT3HO75486 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.16■□□□□ 0.82
SUPT3HO75486 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.16■□□□□ 0.82
SUPT3HO75486 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.16■□□□□ 0.82
SUPT3HO75486 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.16■□□□□ 0.82
SUPT3HO75486 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SUPT3HO75486 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SUPT3HO75486 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SUPT3HO75486 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SUPT3HO75486 AC004854.2-201ENST00000608450 1441 ntBASIC20.16■□□□□ 0.82
SUPT3HO75486 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SUPT3HO75486 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SUPT3HO75486 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SUPT3HO75486 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.15■□□□□ 0.82
SUPT3HO75486 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.15■□□□□ 0.82
SUPT3HO75486 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SUPT3HO75486 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SUPT3HO75486 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.15■□□□□ 0.82
SUPT3HO75486 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.15■□□□□ 0.82
SUPT3HO75486 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SUPT3HO75486 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.15■□□□□ 0.82
SUPT3HO75486 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SUPT3HO75486 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.15■□□□□ 0.82
SUPT3HO75486 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SUPT3HO75486 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SUPT3HO75486 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.15■□□□□ 0.82
SUPT3HO75486 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SUPT3HO75486 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SUPT3HO75486 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.14■□□□□ 0.82
SUPT3HO75486 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SUPT3HO75486 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SUPT3HO75486 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.14■□□□□ 0.81
SUPT3HO75486 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.14■□□□□ 0.81
SUPT3HO75486 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SUPT3HO75486 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SUPT3HO75486 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SUPT3HO75486 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.14■□□□□ 0.81
SUPT3HO75486 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SUPT3HO75486 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.14■□□□□ 0.81
SUPT3HO75486 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.14■□□□□ 0.81
SUPT3HO75486 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SUPT3HO75486 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SUPT3HO75486 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SUPT3HO75486 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SUPT3HO75486 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SUPT3HO75486 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HO75486 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
SUPT3HO75486 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
SUPT3HO75486 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HO75486 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HO75486 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.13■□□□□ 0.81
SUPT3HO75486 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
SUPT3HO75486 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HO75486 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HO75486 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.13■□□□□ 0.81
SUPT3HO75486 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.13■□□□□ 0.81
SUPT3HO75486 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.13■□□□□ 0.81
SUPT3HO75486 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HO75486 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.13■□□□□ 0.81
SUPT3HO75486 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HO75486 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HO75486 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HO75486 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HO75486 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.13■□□□□ 0.81
SUPT3HO75486 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HO75486 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SUPT3HO75486 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HO75486 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SUPT3HO75486 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SUPT3HO75486 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SUPT3HO75486 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SUPT3HO75486 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SUPT3HO75486 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SUPT3HO75486 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.12■□□□□ 0.81
SUPT3HO75486 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SUPT3HO75486 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SUPT3HO75486 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SUPT3HO75486 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SUPT3HO75486 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SUPT3HO75486 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SUPT3HO75486 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms