Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.56■□□□□ 0.72
CPNE3O75131 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE3O75131 KRT18P68-201ENST00000392293 1000 ntBASIC19.56■□□□□ 0.72
CPNE3O75131 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE3O75131 ESRRAP1-201ENST00000400596 1257 ntBASIC19.56■□□□□ 0.72
CPNE3O75131 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.56■□□□□ 0.72
CPNE3O75131 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.56■□□□□ 0.72
CPNE3O75131 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.56■□□□□ 0.72
CPNE3O75131 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE3O75131 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CPNE3O75131 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE3O75131 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CPNE3O75131 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE3O75131 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE3O75131 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE3O75131 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.56■□□□□ 0.72
CPNE3O75131 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CPNE3O75131 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE3O75131 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE3O75131 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPNE3O75131 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CPNE3O75131 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPNE3O75131 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CPNE3O75131 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPNE3O75131 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CPNE3O75131 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPNE3O75131 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPNE3O75131 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CPNE3O75131 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CPNE3O75131 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CPNE3O75131 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.55■□□□□ 0.72
CPNE3O75131 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CPNE3O75131 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.55■□□□□ 0.72
CPNE3O75131 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE3O75131 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE3O75131 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.54■□□□□ 0.72
CPNE3O75131 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE3O75131 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE3O75131 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE3O75131 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE3O75131 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE3O75131 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE3O75131 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE3O75131 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.54■□□□□ 0.72
CPNE3O75131 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.54■□□□□ 0.72
CPNE3O75131 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.54■□□□□ 0.72
CPNE3O75131 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CPNE3O75131 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE3O75131 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
CPNE3O75131 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE3O75131 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE3O75131 CYP21A1P-202ENST00000354927 1481 ntBASIC19.54■□□□□ 0.72
CPNE3O75131 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE3O75131 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE3O75131 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE3O75131 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CPNE3O75131 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CPNE3O75131 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.53■□□□□ 0.72
CPNE3O75131 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CPNE3O75131 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CPNE3O75131 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE3O75131 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.53■□□□□ 0.72
CPNE3O75131 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE3O75131 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE3O75131 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.53■□□□□ 0.72
CPNE3O75131 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.53■□□□□ 0.72
CPNE3O75131 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.53■□□□□ 0.72
CPNE3O75131 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.53■□□□□ 0.72
CPNE3O75131 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE3O75131 UNC93B5-201ENST00000530315 699 ntBASIC19.53■□□□□ 0.72
CPNE3O75131 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE3O75131 AC066615.1-201ENST00000640911 628 ntBASIC19.53■□□□□ 0.72
CPNE3O75131 FBXW4P1-201ENST00000426721 2239 ntBASIC19.53■□□□□ 0.72
CPNE3O75131 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE3O75131 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE3O75131 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.53■□□□□ 0.72
CPNE3O75131 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE3O75131 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE3O75131 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CPNE3O75131 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE3O75131 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CPNE3O75131 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE3O75131 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE3O75131 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CPNE3O75131 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.52■□□□□ 0.72
CPNE3O75131 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.52■□□□□ 0.72
CPNE3O75131 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE3O75131 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE3O75131 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE3O75131 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CPNE3O75131 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CPNE3O75131 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.52■□□□□ 0.72
CPNE3O75131 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE3O75131 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE3O75131 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.52■□□□□ 0.72
CPNE3O75131 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE3O75131 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE3O75131 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.52■□□□□ 0.72
CPNE3O75131 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CPNE3O75131 AC008687.6-201ENST00000596318 630 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms