Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH7O60245 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH7O60245 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDH7O60245 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH7O60245 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
PCDH7O60245 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH7O60245 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
PCDH7O60245 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH7O60245 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH7O60245 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDH7O60245 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH7O60245 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH7O60245 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH7O60245 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH7O60245 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH7O60245 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH7O60245 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH7O60245 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH7O60245 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PCDH7O60245 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH7O60245 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PCDH7O60245 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDH7O60245 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PCDH7O60245 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PCDH7O60245 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH7O60245 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH7O60245 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH7O60245 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDH7O60245 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH7O60245 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH7O60245 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
PCDH7O60245 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDH7O60245 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH7O60245 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDH7O60245 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH7O60245 KRT18P5-201ENST00000436075 1291 ntBASIC19.48■□□□□ 0.71
PCDH7O60245 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH7O60245 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH7O60245 CDV3P1-201ENST00000471403 739 ntBASIC19.48■□□□□ 0.71
PCDH7O60245 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDH7O60245 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH7O60245 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDH7O60245 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH7O60245 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH7O60245 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDH7O60245 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH7O60245 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
PCDH7O60245 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH7O60245 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH7O60245 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH7O60245 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDH7O60245 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDH7O60245 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH7O60245 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
PCDH7O60245 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH7O60245 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
PCDH7O60245 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH7O60245 AC137761.2-201ENST00000561729 223 ntBASIC19.47■□□□□ 0.71
PCDH7O60245 AC145350.3-201ENST00000569033 163 ntBASIC19.47■□□□□ 0.71
PCDH7O60245 AC010536.3-201ENST00000620306 533 ntBASIC19.47■□□□□ 0.71
PCDH7O60245 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDH7O60245 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
PCDH7O60245 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
PCDH7O60245 AL512408.1-201ENST00000569378 2000 ntBASIC19.47■□□□□ 0.71
PCDH7O60245 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH7O60245 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCDH7O60245 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
PCDH7O60245 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH7O60245 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PCDH7O60245 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PCDH7O60245 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
PCDH7O60245 RARRES2P6-201ENST00000567333 442 ntBASIC19.46■□□□□ 0.71
PCDH7O60245 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH7O60245 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH7O60245 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH7O60245 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH7O60245 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
PCDH7O60245 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
PCDH7O60245 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH7O60245 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH7O60245 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH7O60245 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH7O60245 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH7O60245 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH7O60245 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH7O60245 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH7O60245 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
PCDH7O60245 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH7O60245 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH7O60245 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDH7O60245 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.45■□□□□ 0.7
PCDH7O60245 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH7O60245 AC026271.2-201ENST00000428091 497 ntBASIC19.45■□□□□ 0.7
PCDH7O60245 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.45■□□□□ 0.7
PCDH7O60245 KRT18P11-201ENST00000435214 1283 ntBASIC19.45■□□□□ 0.7
PCDH7O60245 TERF1P5-201ENST00000477545 1207 ntBASIC19.45■□□□□ 0.7
PCDH7O60245 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
PCDH7O60245 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH7O60245 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH7O60245 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms