Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.62■□□□□ 0.73
SLC28A2O43868 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC28A2O43868 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC28A2O43868 AC013268.1-206ENST00000638368 961 ntBASIC19.62■□□□□ 0.73
SLC28A2O43868 AC112229.1-201ENST00000639295 961 ntBASIC19.62■□□□□ 0.73
SLC28A2O43868 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC28A2O43868 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC28A2O43868 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC28A2O43868 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC28A2O43868 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.61■□□□□ 0.73
SLC28A2O43868 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC28A2O43868 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC28A2O43868 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SLC28A2O43868 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC28A2O43868 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC28A2O43868 AC211429.1-201ENST00000415277 523 ntBASIC19.61■□□□□ 0.73
SLC28A2O43868 UBE2SP1-201ENST00000450587 669 ntBASIC19.61■□□□□ 0.73
SLC28A2O43868 KRT18P21-201ENST00000515767 1272 ntBASIC19.61■□□□□ 0.73
SLC28A2O43868 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.61■□□□□ 0.73
SLC28A2O43868 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC28A2O43868 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
SLC28A2O43868 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC28A2O43868 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC28A2O43868 AC008694.1-202ENST00000636953 945 ntBASIC19.61■□□□□ 0.73
SLC28A2O43868 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC28A2O43868 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC28A2O43868 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC28A2O43868 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC28A2O43868 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC28A2O43868 AC005224.4-201ENST00000583262 1652 ntBASIC19.61■□□□□ 0.73
SLC28A2O43868 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC28A2O43868 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC28A2O43868 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC28A2O43868 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC28A2O43868 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC28A2O43868 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC28A2O43868 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC28A2O43868 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC28A2O43868 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.6■□□□□ 0.73
SLC28A2O43868 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC28A2O43868 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.6■□□□□ 0.73
SLC28A2O43868 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC28A2O43868 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC28A2O43868 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC28A2O43868 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC28A2O43868 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC28A2O43868 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC28A2O43868 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SLC28A2O43868 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC28A2O43868 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC28A2O43868 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC28A2O43868 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC28A2O43868 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC28A2O43868 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC28A2O43868 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SLC28A2O43868 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.59■□□□□ 0.73
SLC28A2O43868 BX276092.2-201ENST00000417668 665 ntBASIC19.59■□□□□ 0.73
SLC28A2O43868 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SLC28A2O43868 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC28A2O43868 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.59■□□□□ 0.73
SLC28A2O43868 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC28A2O43868 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC28A2O43868 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC28A2O43868 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC28A2O43868 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.58■□□□□ 0.73
SLC28A2O43868 AC055733.4-201ENST00000638462 1354 ntBASIC19.58■□□□□ 0.73
SLC28A2O43868 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
SLC28A2O43868 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.58■□□□□ 0.73
SLC28A2O43868 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC28A2O43868 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC28A2O43868 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC28A2O43868 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.58■□□□□ 0.73
SLC28A2O43868 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
SLC28A2O43868 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC28A2O43868 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SLC28A2O43868 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC28A2O43868 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLC28A2O43868 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SLC28A2O43868 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.58■□□□□ 0.72
SLC28A2O43868 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLC28A2O43868 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC28A2O43868 LINC01023-201ENST00000606054 436 ntBASIC19.58■□□□□ 0.72
SLC28A2O43868 REXO1L12P-201ENST00000622156 912 ntBASIC19.58■□□□□ 0.72
SLC28A2O43868 OR10C1-204ENST00000622521 1039 ntBASIC19.58■□□□□ 0.72
SLC28A2O43868 AC073648.6-201ENST00000641589 218 ntBASIC19.58■□□□□ 0.72
SLC28A2O43868 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC28A2O43868 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SLC28A2O43868 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC28A2O43868 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC28A2O43868 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC28A2O43868 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC28A2O43868 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC28A2O43868 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC28A2O43868 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SLC28A2O43868 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC28A2O43868 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC28A2O43868 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.57■□□□□ 0.72
SLC28A2O43868 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC28A2O43868 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC28A2O43868 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms