Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SMAD6O43541 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD6O43541 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD6O43541 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD6O43541 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD6O43541 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD6O43541 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD6O43541 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.68■□□□□ 0.9
SMAD6O43541 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.68■□□□□ 0.9
SMAD6O43541 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SMAD6O43541 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD6O43541 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD6O43541 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD6O43541 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.68■□□□□ 0.9
SMAD6O43541 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD6O43541 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.68■□□□□ 0.9
SMAD6O43541 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD6O43541 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SMAD6O43541 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD6O43541 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD6O43541 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD6O43541 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SMAD6O43541 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD6O43541 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.67■□□□□ 0.9
SMAD6O43541 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD6O43541 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD6O43541 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.67■□□□□ 0.9
SMAD6O43541 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.67■□□□□ 0.9
SMAD6O43541 AL121603.2-201ENST00000557373 2117 ntBASIC20.67■□□□□ 0.9
SMAD6O43541 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD6O43541 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD6O43541 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.67■□□□□ 0.9
SMAD6O43541 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD6O43541 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD6O43541 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.67■□□□□ 0.9
SMAD6O43541 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMAD6O43541 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD6O43541 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.66■□□□□ 0.9
SMAD6O43541 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD6O43541 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.66■□□□□ 0.9
SMAD6O43541 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SMAD6O43541 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.66■□□□□ 0.9
SMAD6O43541 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.66■□□□□ 0.9
SMAD6O43541 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
SMAD6O43541 KRT8P36-201ENST00000489121 1440 ntBASIC20.66■□□□□ 0.9
SMAD6O43541 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
SMAD6O43541 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD6O43541 AC006128.1-201ENST00000624704 1661 ntBASIC20.66■□□□□ 0.9
SMAD6O43541 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.66■□□□□ 0.9
SMAD6O43541 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD6O43541 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD6O43541 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMAD6O43541 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.66■□□□□ 0.9
SMAD6O43541 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD6O43541 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.65■□□□□ 0.9
SMAD6O43541 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD6O43541 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD6O43541 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD6O43541 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.65■□□□□ 0.9
SMAD6O43541 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD6O43541 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD6O43541 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.65■□□□□ 0.9
SMAD6O43541 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD6O43541 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD6O43541 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD6O43541 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMAD6O43541 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.65■□□□□ 0.9
SMAD6O43541 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMAD6O43541 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SMAD6O43541 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.64■□□□□ 0.9
SMAD6O43541 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SMAD6O43541 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.64■□□□□ 0.89
SMAD6O43541 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
SMAD6O43541 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
SMAD6O43541 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.64■□□□□ 0.89
SMAD6O43541 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.64■□□□□ 0.89
SMAD6O43541 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.64■□□□□ 0.89
SMAD6O43541 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.64■□□□□ 0.89
SMAD6O43541 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.64■□□□□ 0.89
SMAD6O43541 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SMAD6O43541 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.64■□□□□ 0.89
SMAD6O43541 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.64■□□□□ 0.89
SMAD6O43541 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.64■□□□□ 0.89
SMAD6O43541 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.64■□□□□ 0.89
SMAD6O43541 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.64■□□□□ 0.89
SMAD6O43541 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.64■□□□□ 0.89
SMAD6O43541 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.64■□□□□ 0.89
SMAD6O43541 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMAD6O43541 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMAD6O43541 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.64■□□□□ 0.89
SMAD6O43541 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMAD6O43541 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMAD6O43541 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMAD6O43541 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SMAD6O43541 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMAD6O43541 FP700111.2-201ENST00000619190 1892 ntBASIC20.63■□□□□ 0.89
SMAD6O43541 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMAD6O43541 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMAD6O43541 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMAD6O43541 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms