Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.19■□□□□ 0.98
COCHO43405 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COCHO43405 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COCHO43405 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COCHO43405 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COCHO43405 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.18■□□□□ 0.98
COCHO43405 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
COCHO43405 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.18■□□□□ 0.98
COCHO43405 AC098590.1-201ENST00000468126 897 ntBASIC21.18■□□□□ 0.98
COCHO43405 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.18■□□□□ 0.98
COCHO43405 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COCHO43405 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.18■□□□□ 0.98
COCHO43405 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COCHO43405 MIR2861-201ENST00000636310 90 ntBASIC21.18■□□□□ 0.98
COCHO43405 AC066615.1-201ENST00000640911 628 ntBASIC21.18■□□□□ 0.98
COCHO43405 AC073648.6-201ENST00000641589 218 ntBASIC21.18■□□□□ 0.98
COCHO43405 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
COCHO43405 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
COCHO43405 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COCHO43405 AC026310.3-201ENST00000625186 2373 ntBASIC21.18■□□□□ 0.98
COCHO43405 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
COCHO43405 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
COCHO43405 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COCHO43405 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
COCHO43405 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COCHO43405 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.17■□□□□ 0.98
COCHO43405 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COCHO43405 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COCHO43405 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COCHO43405 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COCHO43405 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COCHO43405 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.17■□□□□ 0.98
COCHO43405 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.17■□□□□ 0.98
COCHO43405 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.17■□□□□ 0.98
COCHO43405 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COCHO43405 SOX15-203ENST00000570788 1093 ntBASIC21.17■□□□□ 0.98
COCHO43405 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
COCHO43405 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COCHO43405 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COCHO43405 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COCHO43405 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COCHO43405 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
COCHO43405 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COCHO43405 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
COCHO43405 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COCHO43405 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.17■□□□□ 0.98
COCHO43405 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COCHO43405 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.17■□□□□ 0.98
COCHO43405 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COCHO43405 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COCHO43405 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
COCHO43405 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
COCHO43405 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.16■□□□□ 0.98
COCHO43405 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COCHO43405 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COCHO43405 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COCHO43405 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.16■□□□□ 0.98
COCHO43405 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.16■□□□□ 0.98
COCHO43405 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.16■□□□□ 0.98
COCHO43405 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.16■□□□□ 0.98
COCHO43405 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.16■□□□□ 0.98
COCHO43405 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
COCHO43405 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.16■□□□□ 0.98
COCHO43405 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COCHO43405 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COCHO43405 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.16■□□□□ 0.98
COCHO43405 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COCHO43405 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COCHO43405 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.15■□□□□ 0.98
COCHO43405 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COCHO43405 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COCHO43405 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COCHO43405 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COCHO43405 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COCHO43405 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.15■□□□□ 0.98
COCHO43405 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.15■□□□□ 0.98
COCHO43405 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COCHO43405 PLK5-205ENST00000642079 1969 ntBASIC21.15■□□□□ 0.98
COCHO43405 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COCHO43405 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
COCHO43405 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COCHO43405 KRT8P36-201ENST00000489121 1440 ntBASIC21.14■□□□□ 0.98
COCHO43405 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
COCHO43405 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COCHO43405 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
COCHO43405 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COCHO43405 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
COCHO43405 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.14■□□□□ 0.97
COCHO43405 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.14■□□□□ 0.97
COCHO43405 RPS2P52-201ENST00000469610 820 ntBASIC21.14■□□□□ 0.97
COCHO43405 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.14■□□□□ 0.97
COCHO43405 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.14■□□□□ 0.97
COCHO43405 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
COCHO43405 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COCHO43405 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.14■□□□□ 0.97
COCHO43405 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.14■□□□□ 0.97
COCHO43405 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.13■□□□□ 0.97
COCHO43405 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COCHO43405 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.13■□□□□ 0.97
COCHO43405 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms