Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.26■□□□□ 0.67
RRP8O43159 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.26■□□□□ 0.67
RRP8O43159 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RRP8O43159 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.26■□□□□ 0.67
RRP8O43159 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.26■□□□□ 0.67
RRP8O43159 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RRP8O43159 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RRP8O43159 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.26■□□□□ 0.67
RRP8O43159 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.26■□□□□ 0.67
RRP8O43159 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RRP8O43159 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RRP8O43159 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
RRP8O43159 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RRP8O43159 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RRP8O43159 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.26■□□□□ 0.67
RRP8O43159 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.25■□□□□ 0.67
RRP8O43159 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RRP8O43159 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RRP8O43159 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.25■□□□□ 0.67
RRP8O43159 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
RRP8O43159 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RRP8O43159 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RRP8O43159 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.25■□□□□ 0.67
RRP8O43159 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.25■□□□□ 0.67
RRP8O43159 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.25■□□□□ 0.67
RRP8O43159 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RRP8O43159 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.25■□□□□ 0.67
RRP8O43159 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.25■□□□□ 0.67
RRP8O43159 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RRP8O43159 MIR6786-201ENST00000616843 113 ntBASIC19.25■□□□□ 0.67
RRP8O43159 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.25■□□□□ 0.67
RRP8O43159 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.25■□□□□ 0.67
RRP8O43159 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RRP8O43159 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RRP8O43159 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.25■□□□□ 0.67
RRP8O43159 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.24■□□□□ 0.67
RRP8O43159 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RRP8O43159 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.24■□□□□ 0.67
RRP8O43159 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
RRP8O43159 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RRP8O43159 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RRP8O43159 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RRP8O43159 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.24■□□□□ 0.67
RRP8O43159 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.24■□□□□ 0.67
RRP8O43159 AL353807.1-201ENST00000427475 662 ntBASIC19.24■□□□□ 0.67
RRP8O43159 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.24■□□□□ 0.67
RRP8O43159 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.24■□□□□ 0.67
RRP8O43159 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.24■□□□□ 0.67
RRP8O43159 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RRP8O43159 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.24■□□□□ 0.67
RRP8O43159 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RRP8O43159 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RRP8O43159 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.24■□□□□ 0.67
RRP8O43159 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RRP8O43159 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RRP8O43159 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RRP8O43159 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RRP8O43159 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RRP8O43159 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.23■□□□□ 0.67
RRP8O43159 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.23■□□□□ 0.67
RRP8O43159 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.23■□□□□ 0.67
RRP8O43159 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.23■□□□□ 0.67
RRP8O43159 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.23■□□□□ 0.67
RRP8O43159 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RRP8O43159 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RRP8O43159 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RRP8O43159 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RRP8O43159 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RRP8O43159 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.23■□□□□ 0.67
RRP8O43159 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RRP8O43159 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RRP8O43159 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.22■□□□□ 0.67
RRP8O43159 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.22■□□□□ 0.67
RRP8O43159 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RRP8O43159 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RRP8O43159 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RRP8O43159 AC005521.1-201ENST00000393351 872 ntBASIC19.22■□□□□ 0.67
RRP8O43159 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RRP8O43159 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.22■□□□□ 0.67
RRP8O43159 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RRP8O43159 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.22■□□□□ 0.67
RRP8O43159 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.22■□□□□ 0.67
RRP8O43159 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RRP8O43159 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RRP8O43159 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RRP8O43159 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RRP8O43159 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RRP8O43159 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RRP8O43159 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.21■□□□□ 0.67
RRP8O43159 CLDN5-201ENST00000403084 2357 ntBASIC19.21■□□□□ 0.67
RRP8O43159 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
RRP8O43159 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RRP8O43159 AC139530.1-201ENST00000575312 1977 ntBASIC19.21■□□□□ 0.67
RRP8O43159 AC233723.2-201ENST00000623798 2106 ntBASIC19.21■□□□□ 0.67
RRP8O43159 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.21■□□□□ 0.67
RRP8O43159 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RRP8O43159 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
RRP8O43159 PGM5P4-201ENST00000421970 445 ntBASIC19.21■□□□□ 0.67
RRP8O43159 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.21■□□□□ 0.67
RRP8O43159 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms