Protein–RNA interactions for Protein: O15232

MATN3, Matrilin-3, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3O15232 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
MATN3O15232 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MATN3O15232 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.79■□□□□ 0.92
MATN3O15232 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MATN3O15232 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MATN3O15232 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.79■□□□□ 0.92
MATN3O15232 CROCCP5-201ENST00000436658 830 ntBASIC20.79■□□□□ 0.92
MATN3O15232 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MATN3O15232 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.79■□□□□ 0.92
MATN3O15232 AL050303.2-201ENST00000619798 666 ntBASIC20.79■□□□□ 0.92
MATN3O15232 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MATN3O15232 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MATN3O15232 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MATN3O15232 LINC01006-201ENST00000333319 2292 ntBASIC20.79■□□□□ 0.92
MATN3O15232 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MATN3O15232 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MATN3O15232 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MATN3O15232 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MATN3O15232 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MATN3O15232 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
MATN3O15232 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
MATN3O15232 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MATN3O15232 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.78■□□□□ 0.92
MATN3O15232 AC092720.2-201ENST00000602388 1665 ntBASIC20.78■□□□□ 0.92
MATN3O15232 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.78■□□□□ 0.92
MATN3O15232 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MATN3O15232 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.78■□□□□ 0.92
MATN3O15232 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MATN3O15232 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
MATN3O15232 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
MATN3O15232 AL356652.1-201ENST00000615962 565 ntBASIC20.78■□□□□ 0.92
MATN3O15232 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.78■□□□□ 0.92
MATN3O15232 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MATN3O15232 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MATN3O15232 AC010980.2-201ENST00000587099 1412 ntBASIC20.78■□□□□ 0.92
MATN3O15232 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
MATN3O15232 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
MATN3O15232 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.77■□□□□ 0.92
MATN3O15232 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MATN3O15232 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MATN3O15232 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MATN3O15232 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MATN3O15232 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
MATN3O15232 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
MATN3O15232 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MATN3O15232 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MATN3O15232 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MATN3O15232 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.77■□□□□ 0.92
MATN3O15232 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.77■□□□□ 0.92
MATN3O15232 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.77■□□□□ 0.92
MATN3O15232 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
MATN3O15232 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.77■□□□□ 0.92
MATN3O15232 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
MATN3O15232 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MATN3O15232 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MATN3O15232 LINC01521-201ENST00000504184 1943 ntBASIC20.76■□□□□ 0.91
MATN3O15232 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MATN3O15232 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MATN3O15232 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MATN3O15232 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MATN3O15232 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MATN3O15232 MIR663A-201ENST00000385250 93 ntBASIC20.76■□□□□ 0.91
MATN3O15232 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.76■□□□□ 0.91
MATN3O15232 AC093787.1-201ENST00000450396 207 ntBASIC20.76■□□□□ 0.91
MATN3O15232 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.76■□□□□ 0.91
MATN3O15232 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.76■□□□□ 0.91
MATN3O15232 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.76■□□□□ 0.91
MATN3O15232 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.76■□□□□ 0.91
MATN3O15232 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MATN3O15232 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
MATN3O15232 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.76■□□□□ 0.91
MATN3O15232 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
MATN3O15232 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
MATN3O15232 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
MATN3O15232 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MATN3O15232 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.76■□□□□ 0.91
MATN3O15232 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.76■□□□□ 0.91
MATN3O15232 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
MATN3O15232 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MATN3O15232 AC092667.1-201ENST00000434301 2586 ntBASIC20.75■□□□□ 0.91
MATN3O15232 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MATN3O15232 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.75■□□□□ 0.91
MATN3O15232 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.75■□□□□ 0.91
MATN3O15232 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MATN3O15232 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MATN3O15232 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.75■□□□□ 0.91
MATN3O15232 CYP2T3P-201ENST00000601990 817 ntBASIC20.75■□□□□ 0.91
MATN3O15232 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MATN3O15232 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MATN3O15232 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
MATN3O15232 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MATN3O15232 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MATN3O15232 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MATN3O15232 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.75■□□□□ 0.91
MATN3O15232 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MATN3O15232 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MATN3O15232 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MATN3O15232 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MATN3O15232 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MATN3O15232 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms