Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SNPHO15079 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SNPHO15079 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SNPHO15079 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SNPHO15079 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.16■□□□□ 0.66
SNPHO15079 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.16■□□□□ 0.66
SNPHO15079 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 RARRES2P11-201ENST00000635158 484 ntBASIC19.16■□□□□ 0.66
SNPHO15079 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.16■□□□□ 0.66
SNPHO15079 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 KRT16P2-201ENST00000414673 1423 ntBASIC19.16■□□□□ 0.66
SNPHO15079 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.16■□□□□ 0.66
SNPHO15079 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.16■□□□□ 0.66
SNPHO15079 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SNPHO15079 AC061975.6-201ENST00000579045 1553 ntBASIC19.15■□□□□ 0.66
SNPHO15079 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNPHO15079 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNPHO15079 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNPHO15079 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNPHO15079 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNPHO15079 AC090192.1-201ENST00000517740 490 ntBASIC19.15■□□□□ 0.66
SNPHO15079 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNPHO15079 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.15■□□□□ 0.66
SNPHO15079 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNPHO15079 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SNPHO15079 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.15■□□□□ 0.66
SNPHO15079 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNPHO15079 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNPHO15079 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SNPHO15079 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.14■□□□□ 0.66
SNPHO15079 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SNPHO15079 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
SNPHO15079 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
SNPHO15079 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SNPHO15079 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.14■□□□□ 0.66
SNPHO15079 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.14■□□□□ 0.66
SNPHO15079 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.14■□□□□ 0.66
SNPHO15079 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
SNPHO15079 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNPHO15079 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SNPHO15079 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
SNPHO15079 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNPHO15079 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNPHO15079 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.14■□□□□ 0.65
SNPHO15079 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNPHO15079 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNPHO15079 AC073111.5-205ENST00000641717 521 ntBASIC19.14■□□□□ 0.65
SNPHO15079 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNPHO15079 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNPHO15079 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNPHO15079 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNPHO15079 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SNPHO15079 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SNPHO15079 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNPHO15079 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.14■□□□□ 0.65
SNPHO15079 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.14■□□□□ 0.65
SNPHO15079 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNPHO15079 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.14■□□□□ 0.65
SNPHO15079 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNPHO15079 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNPHO15079 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
SNPHO15079 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNPHO15079 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNPHO15079 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.13■□□□□ 0.65
SNPHO15079 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.13■□□□□ 0.65
SNPHO15079 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNPHO15079 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNPHO15079 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNPHO15079 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNPHO15079 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNPHO15079 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNPHO15079 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNPHO15079 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.13■□□□□ 0.65
SNPHO15079 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.13■□□□□ 0.65
SNPHO15079 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.13■□□□□ 0.65
SNPHO15079 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SNPHO15079 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.13■□□□□ 0.65
SNPHO15079 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.13■□□□□ 0.65
SNPHO15079 AC022726.2-201ENST00000634673 547 ntBASIC19.13■□□□□ 0.65
SNPHO15079 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNPHO15079 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNPHO15079 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNPHO15079 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNPHO15079 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.13■□□□□ 0.65
SNPHO15079 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNPHO15079 AL020996.1-203ENST00000536896 2307 ntBASIC19.13■□□□□ 0.65
SNPHO15079 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms