Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC28A1O00337 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A1O00337 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A1O00337 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SLC28A1O00337 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A1O00337 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A1O00337 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A1O00337 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SLC28A1O00337 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC28A1O00337 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SLC28A1O00337 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC28A1O00337 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC28A1O00337 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC28A1O00337 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC28A1O00337 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC28A1O00337 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC28A1O00337 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.64■□□□□ 0.73
SLC28A1O00337 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC28A1O00337 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC28A1O00337 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC28A1O00337 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC28A1O00337 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC28A1O00337 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC28A1O00337 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC28A1O00337 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC28A1O00337 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC28A1O00337 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC28A1O00337 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC28A1O00337 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC28A1O00337 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A1O00337 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A1O00337 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SLC28A1O00337 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC28A1O00337 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A1O00337 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A1O00337 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SLC28A1O00337 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC28A1O00337 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
SLC28A1O00337 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A1O00337 RBM17P2-201ENST00000616397 1405 ntBASIC19.63■□□□□ 0.73
SLC28A1O00337 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A1O00337 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A1O00337 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC28A1O00337 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC28A1O00337 AC091799.1-201ENST00000422823 811 ntBASIC19.63■□□□□ 0.73
SLC28A1O00337 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A1O00337 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.63■□□□□ 0.73
SLC28A1O00337 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.63■□□□□ 0.73
SLC28A1O00337 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC28A1O00337 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A1O00337 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SLC28A1O00337 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A1O00337 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC28A1O00337 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC28A1O00337 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.62■□□□□ 0.73
SLC28A1O00337 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SLC28A1O00337 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC28A1O00337 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC28A1O00337 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC28A1O00337 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SLC28A1O00337 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SLC28A1O00337 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC28A1O00337 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC28A1O00337 AC004854.2-201ENST00000608450 1441 ntBASIC19.62■□□□□ 0.73
SLC28A1O00337 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC28A1O00337 AC007322.3-201ENST00000426526 701 ntBASIC19.62■□□□□ 0.73
SLC28A1O00337 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC28A1O00337 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.62■□□□□ 0.73
SLC28A1O00337 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC28A1O00337 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC28A1O00337 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC28A1O00337 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC28A1O00337 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SLC28A1O00337 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC28A1O00337 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC28A1O00337 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SLC28A1O00337 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC28A1O00337 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SLC28A1O00337 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
SLC28A1O00337 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC28A1O00337 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC28A1O00337 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC28A1O00337 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SLC28A1O00337 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SLC28A1O00337 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC28A1O00337 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC28A1O00337 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.61■□□□□ 0.73
SLC28A1O00337 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC28A1O00337 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC28A1O00337 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC28A1O00337 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC28A1O00337 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC28A1O00337 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC28A1O00337 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC28A1O00337 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC28A1O00337 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC28A1O00337 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC28A1O00337 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC28A1O00337 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC28A1O00337 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms