Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.63■□□□□ 0.89
AP3B1O00203 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
AP3B1O00203 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
AP3B1O00203 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3B1O00203 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3B1O00203 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3B1O00203 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
AP3B1O00203 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3B1O00203 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.62■□□□□ 0.89
AP3B1O00203 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3B1O00203 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3B1O00203 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3B1O00203 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.62■□□□□ 0.89
AP3B1O00203 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP3B1O00203 SLC25A24-204ENST00000569674 2357 ntBASIC20.62■□□□□ 0.89
AP3B1O00203 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
AP3B1O00203 AL162412.1-201ENST00000567129 965 ntBASIC20.62■□□□□ 0.89
AP3B1O00203 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
AP3B1O00203 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.62■□□□□ 0.89
AP3B1O00203 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3B1O00203 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3B1O00203 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.62■□□□□ 0.89
AP3B1O00203 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
AP3B1O00203 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3B1O00203 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3B1O00203 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3B1O00203 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP3B1O00203 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3B1O00203 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP3B1O00203 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.62■□□□□ 0.89
AP3B1O00203 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3B1O00203 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.61■□□□□ 0.89
AP3B1O00203 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP3B1O00203 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.61■□□□□ 0.89
AP3B1O00203 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
AP3B1O00203 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
AP3B1O00203 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP3B1O00203 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
AP3B1O00203 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
AP3B1O00203 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP3B1O00203 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.61■□□□□ 0.89
AP3B1O00203 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.61■□□□□ 0.89
AP3B1O00203 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.61■□□□□ 0.89
AP3B1O00203 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP3B1O00203 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
AP3B1O00203 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
AP3B1O00203 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP3B1O00203 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
AP3B1O00203 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
AP3B1O00203 KRT8P36-201ENST00000489121 1440 ntBASIC20.61■□□□□ 0.89
AP3B1O00203 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP3B1O00203 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
AP3B1O00203 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
AP3B1O00203 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
AP3B1O00203 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP3B1O00203 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.6■□□□□ 0.89
AP3B1O00203 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP3B1O00203 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
AP3B1O00203 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP3B1O00203 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.6■□□□□ 0.89
AP3B1O00203 TERF1P5-201ENST00000477545 1207 ntBASIC20.6■□□□□ 0.89
AP3B1O00203 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
AP3B1O00203 AL591742.1-201ENST00000604433 565 ntBASIC20.6■□□□□ 0.89
AP3B1O00203 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP3B1O00203 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
AP3B1O00203 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.6■□□□□ 0.89
AP3B1O00203 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP3B1O00203 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
AP3B1O00203 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.59■□□□□ 0.89
AP3B1O00203 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
AP3B1O00203 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
AP3B1O00203 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
AP3B1O00203 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP3B1O00203 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
AP3B1O00203 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP3B1O00203 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.59■□□□□ 0.89
AP3B1O00203 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.59■□□□□ 0.89
AP3B1O00203 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.59■□□□□ 0.89
AP3B1O00203 KRT18P61-201ENST00000585825 1298 ntBASIC20.59■□□□□ 0.89
AP3B1O00203 AC010536.3-201ENST00000620306 533 ntBASIC20.59■□□□□ 0.89
AP3B1O00203 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
AP3B1O00203 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.59■□□□□ 0.89
AP3B1O00203 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.59■□□□□ 0.89
AP3B1O00203 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.59■□□□□ 0.89
AP3B1O00203 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP3B1O00203 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
AP3B1O00203 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP3B1O00203 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.59■□□□□ 0.89
AP3B1O00203 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP3B1O00203 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.58■□□□□ 0.89
AP3B1O00203 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP3B1O00203 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP3B1O00203 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
AP3B1O00203 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.58■□□□□ 0.89
AP3B1O00203 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP3B1O00203 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.58■□□□□ 0.89
AP3B1O00203 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.58■□□□□ 0.89
AP3B1O00203 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
AP3B1O00203 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
AP3B1O00203 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms