Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRRM4A7MD48 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SRRM4A7MD48 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.45■□□□□ 0.22
SRRM4A7MD48 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SRRM4A7MD48 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM4A7MD48 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.44■□□□□ 0.22
SRRM4A7MD48 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.44■□□□□ 0.22
SRRM4A7MD48 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SRRM4A7MD48 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SRRM4A7MD48 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.44■□□□□ 0.22
SRRM4A7MD48 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM4A7MD48 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM4A7MD48 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM4A7MD48 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.44■□□□□ 0.22
SRRM4A7MD48 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM4A7MD48 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
SRRM4A7MD48 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.44■□□□□ 0.22
SRRM4A7MD48 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM4A7MD48 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM4A7MD48 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.44■□□□□ 0.22
SRRM4A7MD48 MYCNOS-205ENST00000641950 531 ntBASIC16.44■□□□□ 0.22
SRRM4A7MD48 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SRRM4A7MD48 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.44■□□□□ 0.22
SRRM4A7MD48 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.44■□□□□ 0.22
SRRM4A7MD48 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM4A7MD48 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM4A7MD48 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SRRM4A7MD48 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM4A7MD48 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM4A7MD48 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM4A7MD48 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRRM4A7MD48 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.44■□□□□ 0.22
SRRM4A7MD48 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.44■□□□□ 0.22
SRRM4A7MD48 AC092720.2-201ENST00000602388 1665 ntBASIC16.43■□□□□ 0.22
SRRM4A7MD48 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SRRM4A7MD48 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.43■□□□□ 0.22
SRRM4A7MD48 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
SRRM4A7MD48 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SRRM4A7MD48 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.43■□□□□ 0.22
SRRM4A7MD48 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SRRM4A7MD48 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SRRM4A7MD48 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.43■□□□□ 0.22
SRRM4A7MD48 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SRRM4A7MD48 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SRRM4A7MD48 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.43■□□□□ 0.22
SRRM4A7MD48 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SRRM4A7MD48 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.43■□□□□ 0.22
SRRM4A7MD48 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.43■□□□□ 0.22
SRRM4A7MD48 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.43■□□□□ 0.22
SRRM4A7MD48 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.43■□□□□ 0.22
SRRM4A7MD48 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SRRM4A7MD48 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.43■□□□□ 0.22
SRRM4A7MD48 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SRRM4A7MD48 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SRRM4A7MD48 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SRRM4A7MD48 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.43■□□□□ 0.22
SRRM4A7MD48 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SRRM4A7MD48 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SRRM4A7MD48 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SRRM4A7MD48 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
SRRM4A7MD48 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRRM4A7MD48 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
SRRM4A7MD48 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SRRM4A7MD48 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRRM4A7MD48 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRRM4A7MD48 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SRRM4A7MD48 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SRRM4A7MD48 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.42■□□□□ 0.22
SRRM4A7MD48 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.42■□□□□ 0.22
SRRM4A7MD48 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.42■□□□□ 0.22
SRRM4A7MD48 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SRRM4A7MD48 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRRM4A7MD48 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.42■□□□□ 0.22
SRRM4A7MD48 AC007322.3-201ENST00000426526 701 ntBASIC16.42■□□□□ 0.22
SRRM4A7MD48 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.42■□□□□ 0.22
SRRM4A7MD48 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.42■□□□□ 0.22
SRRM4A7MD48 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRRM4A7MD48 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SRRM4A7MD48 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.42■□□□□ 0.22
SRRM4A7MD48 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SRRM4A7MD48 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
SRRM4A7MD48 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM4A7MD48 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM4A7MD48 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SRRM4A7MD48 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM4A7MD48 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM4A7MD48 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM4A7MD48 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM4A7MD48 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.41■□□□□ 0.22
SRRM4A7MD48 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM4A7MD48 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM4A7MD48 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SRRM4A7MD48 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.41■□□□□ 0.22
SRRM4A7MD48 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.41■□□□□ 0.22
SRRM4A7MD48 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.41■□□□□ 0.22
SRRM4A7MD48 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.41■□□□□ 0.22
SRRM4A7MD48 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
SRRM4A7MD48 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRRM4A7MD48 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SRRM4A7MD48 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms