Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC01548A6NM66 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC01548A6NM66 AC069152.1-201ENST00000438030 544 ntBASIC16.13■□□□□ 0.17
LINC01548A6NM66 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC01548A6NM66 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.13■□□□□ 0.17
LINC01548A6NM66 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC01548A6NM66 MIR4758-201ENST00000577688 71 ntBASIC16.13■□□□□ 0.17
LINC01548A6NM66 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LINC01548A6NM66 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
LINC01548A6NM66 FP700111.2-201ENST00000619190 1892 ntBASIC16.13■□□□□ 0.17
LINC01548A6NM66 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01548A6NM66 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.13■□□□□ 0.17
LINC01548A6NM66 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01548A6NM66 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LINC01548A6NM66 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC01548A6NM66 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
LINC01548A6NM66 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LINC01548A6NM66 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LINC01548A6NM66 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
LINC01548A6NM66 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.12■□□□□ 0.17
LINC01548A6NM66 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01548A6NM66 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01548A6NM66 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01548A6NM66 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01548A6NM66 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01548A6NM66 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01548A6NM66 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.12■□□□□ 0.17
LINC01548A6NM66 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.12■□□□□ 0.17
LINC01548A6NM66 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.12■□□□□ 0.17
LINC01548A6NM66 AC092118.2-201ENST00000613495 667 ntBASIC16.12■□□□□ 0.17
LINC01548A6NM66 MIR2861-201ENST00000636310 90 ntBASIC16.12■□□□□ 0.17
LINC01548A6NM66 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01548A6NM66 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.12■□□□□ 0.17
LINC01548A6NM66 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.12■□□□□ 0.17
LINC01548A6NM66 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.12■□□□□ 0.17
LINC01548A6NM66 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01548A6NM66 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01548A6NM66 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01548A6NM66 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.11■□□□□ 0.17
LINC01548A6NM66 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01548A6NM66 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01548A6NM66 AC087633.2-202ENST00000565166 1439 ntBASIC16.11■□□□□ 0.17
LINC01548A6NM66 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.11■□□□□ 0.17
LINC01548A6NM66 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01548A6NM66 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01548A6NM66 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01548A6NM66 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LINC01548A6NM66 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
LINC01548A6NM66 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01548A6NM66 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01548A6NM66 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01548A6NM66 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LINC01548A6NM66 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01548A6NM66 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.11■□□□□ 0.17
LINC01548A6NM66 DUSP5P2-201ENST00000426873 1033 ntBASIC16.11■□□□□ 0.17
LINC01548A6NM66 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.11■□□□□ 0.17
LINC01548A6NM66 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.11■□□□□ 0.17
LINC01548A6NM66 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01548A6NM66 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
LINC01548A6NM66 AC133041.1-202ENST00000642053 222 ntBASIC16.11■□□□□ 0.17
LINC01548A6NM66 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.11■□□□□ 0.17
LINC01548A6NM66 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01548A6NM66 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LINC01548A6NM66 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01548A6NM66 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01548A6NM66 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.11■□□□□ 0.17
LINC01548A6NM66 SLC25A24-204ENST00000569674 2357 ntBASIC16.11■□□□□ 0.17
LINC01548A6NM66 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC01548A6NM66 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC01548A6NM66 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.1■□□□□ 0.17
LINC01548A6NM66 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC01548A6NM66 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.1■□□□□ 0.17
LINC01548A6NM66 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC01548A6NM66 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LINC01548A6NM66 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LINC01548A6NM66 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LINC01548A6NM66 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
LINC01548A6NM66 AL356652.1-201ENST00000615962 565 ntBASIC16.1■□□□□ 0.17
LINC01548A6NM66 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LINC01548A6NM66 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC01548A6NM66 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LINC01548A6NM66 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01548A6NM66 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms