Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PLEKHD1A6NEE1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PLEKHD1A6NEE1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
PLEKHD1A6NEE1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
PLEKHD1A6NEE1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
PLEKHD1A6NEE1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC31.72■■■□□ 2.67
PLEKHD1A6NEE1 AF186192.3-201ENST00000583427 947 ntBASIC31.72■■■□□ 2.67
PLEKHD1A6NEE1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PLEKHD1A6NEE1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
PLEKHD1A6NEE1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PLEKHD1A6NEE1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
PLEKHD1A6NEE1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
PLEKHD1A6NEE1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC31.71■■■□□ 2.67
PLEKHD1A6NEE1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
PLEKHD1A6NEE1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC31.71■■■□□ 2.67
PLEKHD1A6NEE1 AL445228.2-201ENST00000605589 952 ntBASIC31.71■■■□□ 2.67
PLEKHD1A6NEE1 Six3os1_6.1-201ENST00000620790 196 ntBASIC31.71■■■□□ 2.67
PLEKHD1A6NEE1 AL121829.2-201ENST00000620908 328 ntBASIC31.71■■■□□ 2.67
PLEKHD1A6NEE1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC31.71■■■□□ 2.67
PLEKHD1A6NEE1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
PLEKHD1A6NEE1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PLEKHD1A6NEE1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PLEKHD1A6NEE1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
PLEKHD1A6NEE1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PLEKHD1A6NEE1 TMPOP1-202ENST00000424642 1267 ntBASIC31.7■■■□□ 2.67
PLEKHD1A6NEE1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC31.7■■■□□ 2.67
PLEKHD1A6NEE1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
PLEKHD1A6NEE1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
PLEKHD1A6NEE1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
PLEKHD1A6NEE1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
PLEKHD1A6NEE1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
PLEKHD1A6NEE1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
PLEKHD1A6NEE1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PLEKHD1A6NEE1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PLEKHD1A6NEE1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC31.69■■■□□ 2.66
PLEKHD1A6NEE1 MMP23A-201ENST00000234610 1017 ntBASIC31.69■■■□□ 2.66
PLEKHD1A6NEE1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC31.69■■■□□ 2.66
PLEKHD1A6NEE1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PLEKHD1A6NEE1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC31.69■■■□□ 2.66
PLEKHD1A6NEE1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC31.69■■■□□ 2.66
PLEKHD1A6NEE1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PLEKHD1A6NEE1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
PLEKHD1A6NEE1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
PLEKHD1A6NEE1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
PLEKHD1A6NEE1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PLEKHD1A6NEE1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
PLEKHD1A6NEE1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PLEKHD1A6NEE1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC31.68■■■□□ 2.66
PLEKHD1A6NEE1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
PLEKHD1A6NEE1 HTR7P1-201ENST00000538670 1336 ntBASIC31.68■■■□□ 2.66
PLEKHD1A6NEE1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC31.68■■■□□ 2.66
PLEKHD1A6NEE1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
PLEKHD1A6NEE1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PLEKHD1A6NEE1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PLEKHD1A6NEE1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC31.67■■■□□ 2.66
PLEKHD1A6NEE1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
PLEKHD1A6NEE1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC31.67■■■□□ 2.66
PLEKHD1A6NEE1 AL355355.2-201ENST00000442321 338 ntBASIC31.67■■■□□ 2.66
PLEKHD1A6NEE1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC31.67■■■□□ 2.66
PLEKHD1A6NEE1 KRT16P5-201ENST00000455284 522 ntBASIC31.67■■■□□ 2.66
PLEKHD1A6NEE1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC31.67■■■□□ 2.66
PLEKHD1A6NEE1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC31.67■■■□□ 2.66
PLEKHD1A6NEE1 RN7SL850P-201ENST00000579959 291 ntBASIC31.67■■■□□ 2.66
PLEKHD1A6NEE1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
PLEKHD1A6NEE1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC31.66■■■□□ 2.66
PLEKHD1A6NEE1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PLEKHD1A6NEE1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC31.66■■■□□ 2.66
PLEKHD1A6NEE1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC31.66■■■□□ 2.66
PLEKHD1A6NEE1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PLEKHD1A6NEE1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC31.66■■■□□ 2.66
PLEKHD1A6NEE1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
PLEKHD1A6NEE1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PLEKHD1A6NEE1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PLEKHD1A6NEE1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC31.65■■■□□ 2.66
PLEKHD1A6NEE1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
PLEKHD1A6NEE1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PLEKHD1A6NEE1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC31.64■■■□□ 2.66
PLEKHD1A6NEE1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PLEKHD1A6NEE1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC31.64■■■□□ 2.66
PLEKHD1A6NEE1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC31.64■■■□□ 2.66
PLEKHD1A6NEE1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC31.64■■■□□ 2.66
PLEKHD1A6NEE1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
PLEKHD1A6NEE1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
PLEKHD1A6NEE1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC31.64■■■□□ 2.66
PLEKHD1A6NEE1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
PLEKHD1A6NEE1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PLEKHD1A6NEE1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.65
PLEKHD1A6NEE1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
PLEKHD1A6NEE1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.65
PLEKHD1A6NEE1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
PLEKHD1A6NEE1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC31.63■■■□□ 2.65
PLEKHD1A6NEE1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC31.63■■■□□ 2.65
PLEKHD1A6NEE1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC31.63■■■□□ 2.65
PLEKHD1A6NEE1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
PLEKHD1A6NEE1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
PLEKHD1A6NEE1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC31.63■■■□□ 2.65
PLEKHD1A6NEE1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
PLEKHD1A6NEE1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC31.63■■■□□ 2.65
PLEKHD1A6NEE1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
PLEKHD1A6NEE1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms