Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT1A5YKK6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT1A5YKK6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT1A5YKK6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CNOT1A5YKK6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT1A5YKK6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.68■□□□□ 0.74
CNOT1A5YKK6 MIR1238-201ENST00000408483 83 ntBASIC19.68■□□□□ 0.74
CNOT1A5YKK6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.68■□□□□ 0.74
CNOT1A5YKK6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT1A5YKK6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT1A5YKK6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT1A5YKK6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT1A5YKK6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT1A5YKK6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT1A5YKK6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT1A5YKK6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CNOT1A5YKK6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNOT1A5YKK6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.68■□□□□ 0.74
CNOT1A5YKK6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.68■□□□□ 0.74
CNOT1A5YKK6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT1A5YKK6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT1A5YKK6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT1A5YKK6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.67■□□□□ 0.74
CNOT1A5YKK6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT1A5YKK6 AC093323.1-202ENST00000635031 2045 ntBASIC19.67■□□□□ 0.74
CNOT1A5YKK6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT1A5YKK6 AC010542.4-201ENST00000563151 1910 ntBASIC19.67■□□□□ 0.74
CNOT1A5YKK6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT1A5YKK6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CNOT1A5YKK6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT1A5YKK6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.67■□□□□ 0.74
CNOT1A5YKK6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNOT1A5YKK6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT1A5YKK6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.66■□□□□ 0.74
CNOT1A5YKK6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CNOT1A5YKK6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.66■□□□□ 0.74
CNOT1A5YKK6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.66■□□□□ 0.74
CNOT1A5YKK6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT1A5YKK6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT1A5YKK6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT1A5YKK6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT1A5YKK6 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.66■□□□□ 0.74
CNOT1A5YKK6 AC026396.1-201ENST00000419388 421 ntBASIC19.66■□□□□ 0.74
CNOT1A5YKK6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CNOT1A5YKK6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNOT1A5YKK6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.66■□□□□ 0.74
CNOT1A5YKK6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 CYP21A1P-202ENST00000354927 1481 ntBASIC19.65■□□□□ 0.74
CNOT1A5YKK6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNOT1A5YKK6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CNOT1A5YKK6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CNOT1A5YKK6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.64■□□□□ 0.74
CNOT1A5YKK6 MYC-208ENST00000641036 567 ntBASIC19.64■□□□□ 0.74
CNOT1A5YKK6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CNOT1A5YKK6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.64■□□□□ 0.73
CNOT1A5YKK6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNOT1A5YKK6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNOT1A5YKK6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CNOT1A5YKK6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.64■□□□□ 0.73
CNOT1A5YKK6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
CNOT1A5YKK6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.64■□□□□ 0.73
CNOT1A5YKK6 AC022616.7-201ENST00000525383 220 ntBASIC19.64■□□□□ 0.73
CNOT1A5YKK6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.64■□□□□ 0.73
CNOT1A5YKK6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNOT1A5YKK6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNOT1A5YKK6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNOT1A5YKK6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNOT1A5YKK6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNOT1A5YKK6 AC063952.2-201ENST00000498792 1227 ntBASIC19.63■□□□□ 0.73
CNOT1A5YKK6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.63■□□□□ 0.73
CNOT1A5YKK6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNOT1A5YKK6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.63■□□□□ 0.73
CNOT1A5YKK6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CNOT1A5YKK6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNOT1A5YKK6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNOT1A5YKK6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms